Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris)

por Gao, Dongying, Abernathy, Brian, Rohksar, Daniel, Schmutz, Jeremy, Jackson, Scott A.
Publicado 2014

Complete Plastome Sequences from Glycine syndetika and Six Additional Perennial Wild Relatives of Soybean

por Sherman-Broyles, Sue, Bombarely, Aureliano, Grimwood, Jane, Schmutz, Jeremy, Doyle, Jeff
Publicado 2014

High Density Genetic Maps of Seashore Paspalum Using Genotyping-By-Sequencing and Their Relationship to The Sorghum Bicolor Genome

por Qi, Peng, Eudy, Douglas, Schnable, James C., Schmutz, Jeremy, Raymer, Paul L., Devos, Katrien M.
Publicado 2019

SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data

por Wang, Juexin, Hossain, Md Shakhawat, Lyu, Zhen, Schmutz, Jeremy, Stacey, Gary, Xu, Dong, Joshi, Trupti
Publicado 2019

Re-evaluating the Systematics of Dendrolycopodium Using Restriction-Site Associated DNA-Sequencing

por Petlewski, Alaina R., Hauser, Duncan A., Kim, Min, Schmutz, Jeremy, Grimwood, Jane, Li, Fay-Wei
Publicado 2022

Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

por Milano, Elizabeth R., Payne, Courtney E., Wolfrum, Ed, Lovell, John, Jenkins, Jerry, Schmutz, Jeremy, Juenger, Thomas E.
Publicado 2018

The Genetic Architecture of Shoot and Root Trait Divergence Between Mesic and Xeric Ecotypes of a Perennial Grass

por Khasanova, Albina, Lovell, John T., Bonnette, Jason, Weng, Xiaoyu, Jenkins, Jerry, Yoshinaga, Yuko, Schmutz, Jeremy, Juenger, Thomas E.
Publicado 2019

Sequencing and Analysis of the Sex Determination Region of Populus trichocarpa

por Zhou, Ran, Macaya-Sanz, David, Schmutz, Jeremy, Jenkins, Jerry W., Tuskan, Gerald A., DiFazio, Stephen P.
Publicado 2020

Representing sex chromosomes in genome assemblies

por Carey, Sarah B., Lovell, John T., Jenkins, Jerry, Leebens-Mack, Jim, Schmutz, Jeremy, Wilson, Melissa A., Harkess, Alex
Publicado 2022

Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Using Reciprocal Transplants

por Bhaskara, Govinal Badiger, Haque, Taslima, Bonnette, Jason E, Napier, Joseph D, Bauer, Diane, Schmutz, Jeremy, Juenger, Thomas E
Publicado 2023

Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01

por Song, Qijian, Jenkins, Jerry, Jia, Gaofeng, Hyten, David L., Pantalone, Vince, Jackson, Scott A., Schmutz, Jeremy, Cregan, Perry B.
Publicado 2016

Hybridization History and Repetitive Element Content in the Genome of a Homoploid Hybrid, Yucca gloriosa (Asparagaceae)

por Heyduk, Karolina, McAssey, Edward V., Grimwood, Jane, Shu, Shengqiang, Schmutz, Jeremy, McKain, Michael R., Leebens-Mack, Jim
Publicado 2021

Developing market class specific InDel markers from next generation sequence data in Phaseolus vulgaris L.

por Moghaddam, Samira Mafi, Song, Qijian, Mamidi, Sujan, Schmutz, Jeremy, Lee, Rian, Cregan, Perry, Osorno, Juan M., McClean, Phillip E.
Publicado 2014

Population genomics and climate adaptation of a C4 perennial grass, Panicum hallii (Poaceae)

por Gould, Billie A., Palacio-Mejia, Juan Diego, Jenkins, Jerry, Mamidi, Sujan, Barry, Kerrie, Schmutz, Jeremy, Juenger, Thomas E., Lowry, David B.
Publicado 2018

Wavelet-Based Genomic Signal Processing for Centromere Identification and Hypothesis Generation

por Weighill, Deborah, Macaya-Sanz, David, DiFazio, Stephen Paul, Joubert, Wayne, Shah, Manesh, Schmutz, Jeremy, Sreedasyam, Avinash, Tuskan, Gerald, Jacobson, Daniel
Publicado 2019

GENESPACE tracks regions of interest and gene copy number variation across multiple genomes

por Lovell, John T, Sreedasyam, Avinash, Schranz, M Eric, Wilson, Melissa, Carlson, Joseph W, Harkess, Alex, Emms, David, Goodstein, David M, Schmutz, Jeremy
Publicado 2022

Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response

por O'Rourke, Jamie A, Nelson, Rex T, Grant, David, Schmutz, Jeremy, Grimwood, Jane, Cannon, Steven, Vance, Carroll P, Graham, Michelle A, Shoemaker, Randy C
Publicado 2009

A Genome-Wide Survey of Switchgrass Genome Structure and Organization

por Sharma, Manoj K., Sharma, Rita, Cao, Peijian, Jenkins, Jerry, Bartley, Laura E., Qualls, Morgan, Grimwood, Jane, Schmutz, Jeremy, Rokhsar, Daniel, Ronald, Pamela C.
Publicado 2012

Genome sequence of the plant growth promoting endophytic yeast Rhodotorula graminis WP1

por Firrincieli, Andrea, Otillar, Robert, Salamov, Asaf, Schmutz, Jeremy, Khan, Zareen, Redman, Regina S., Fleck, Neil D., Lindquist, Erika, Grigoriev, Igor V., Doty, Sharon L.
Publicado 2015

Genomic prediction of switchgrass winter survivorship across diverse lowland populations

por Tilhou, Neal W, Poudel, Hari P, Lovell, John, Mamidi, Sujan, Schmutz, Jeremy, Daum, Christopher, Zane, Matthew, Yoshinaga, Yuko, Lipzen, Anna, Casler, Michael D
Publicado 2023