Pressure-specific and multiple pressure response of fish assemblages in European running waters()

por Schinegger, Rafaela, Trautwein, Clemens, Schmutz, Stefan
Publicado 2013

Cumulative effects of land use on fish metrics in different types of running waters in Austria

por Trautwein, Clemens, Schinegger, Rafaela, Schmutz, Stefan
Publicado 2011

Multiple human pressures and their spatial patterns in European running waters

por Schinegger, Rafaela, Trautwein, Clemens, Melcher, Andreas, Schmutz, Stefan
Publicado 2012

A new fish-based multi-metric assessment index for cyprinid streams in the Iranian Caspian Sea Basin

por Mostafavi, Hossein, Schinegger, Rafaela, Melcher, Andreas, Moder, Karl, Mielach, Carina, Schmutz, Stefan
Publicado 2015

Predicting presence and absence of trout (Salmo trutta) in Iran

por Mostafavi, Hossein, Pletterbauer, Florian, Coad, Brian W., Mahini, Abdolrassoul Salman, Schinegger, Rafaela, Unfer, Günther, Trautwein, Clemens, Schmutz, Stefan
Publicado 2014

Meningitis and epididymitis caused by Toscana virus infection imported to Switzerland diagnosed by metagenomic sequencing: a case report

por Tschumi, Fabian, Schmutz, Stefan, Kufner, Verena, Heider, Maike, Pigny, Fiona, Schreiner, Bettina, Capaul, Riccarda, Achermann, Yvonne, Huber, Michael
Publicado 2019

Optimization and validation of sample preparation for metagenomic sequencing of viruses in clinical samples

por Lewandowska, Dagmara W., Zagordi, Osvaldo, Geissberger, Fabienne-Desirée, Kufner, Verena, Schmutz, Stefan, Böni, Jürg, Metzner, Karin J., Trkola, Alexandra, Huber, Michael
Publicado 2017

Correction to: Optimization and validation of sample preparation for metagenomic sequencing of viruses in clinical samples

por Lewandowska, Dagmara W., Zagordi, Osvaldo, Geissberger, Fabienne-Desirée, Kufner, Verena, Schmutz, Stefan, Böni, Jürg, Metzner, Karin J., Trkola, Alexandra, Huber, Michael
Publicado 2017

Profiling host ANP32A splicing landscapes to predict influenza A virus polymerase adaptation

por Domingues, Patricia, Eletto, Davide, Magnus, Carsten, Turkington, Hannah L., Schmutz, Stefan, Zagordi, Osvaldo, Lenk, Matthias, Beer, Martin, Stertz, Silke, Hale, Benjamin G.
Publicado 2019

Two Years of Viral Metagenomics in a Tertiary Diagnostics Unit: Evaluation of the First 105 Cases

por Kufner, Verena, Plate, Andreas, Schmutz, Stefan, Braun, Dominique L., Günthard, Huldrych F., Capaul, Riccarda, Zbinden, Andrea, Mueller, Nicolas J., Trkola, Alexandra, Huber, Michael
Publicado 2019

SARS-CoV-2 variants reveal features critical for replication in primary human cells

por Pohl, Marie O., Busnadiego, Idoia, Kufner, Verena, Glas, Irina, Karakus, Umut, Schmutz, Stefan, Zaheri, Maryam, Abela, Irene, Trkola, Alexandra, Huber, Michael, Stertz, Silke, Hale, Benjamin G.
Publicado 2021

Spontaneous reactivation of latent HIV-1 promoters is linked to the cell cycle as revealed by a genetic-insulators-containing dual-fluorescence HIV-1-based vector

por Kok, Yik Lim, Schmutz, Stefan, Inderbitzin, Anne, Neumann, Kathrin, Kelley, Audrey, Jörimann, Lisa, Shilaih, Mohaned, Vongrad, Valentina, Kouyos, Roger D., Günthard, Huldrych F., Berens, Christian, Metzner, Karin J.
Publicado 2018

Nosocomial COVID-19 Incidence and Secondary Attack Rates among Patients of Tertiary Care Center, Zurich, Switzerland

por Wolfensberger, Aline, Kufner, Verena, Zaheri, Maryam, Zeeb, Marius, Nortes, Isabelle, Schreiber, Peter W., Vazquez, Miriam, Schärer, Verena, Scheier, Thomas, Schmutz, Stefan, Probst, Elisabeth, Saleschus, Dirk, Huber, Michael, Rampini, Silvana K., Zingg, Walter
Publicado 2022

Viral Metagenomics in the Clinical Realm: Lessons Learned from a Swiss-Wide Ring Trial

por Junier, Thomas, Huber, Michael, Schmutz, Stefan, Kufner, Verena, Zagordi, Osvaldo, Neuenschwander, Stefan, Ramette, Alban, Kubacki, Jakub, Bachofen, Claudia, Qi, Weihong, Laubscher, Florian, Cordey, Samuel, Kaiser, Laurent, Beuret, Christian, Barbié, Valérie, Fellay, Jacques, Lebrand, Aitana
Publicado 2019

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations

por Giallonardo, Francesca Di, Töpfer, Armin, Rey, Melanie, Prabhakaran, Sandhya, Duport, Yannick, Leemann, Christine, Schmutz, Stefan, Campbell, Nottania K., Joos, Beda, Lecca, Maria Rita, Patrignani, Andrea, Däumer, Martin, Beisel, Christian, Rusert, Peter, Trkola, Alexandra, Günthard, Huldrych F., Roth, Volker, Beerenwinkel, Niko, Metzner, Karin J.
Publicado 2014

Secondary attack rates from asymptomatic and symptomatic influenza virus shedders in hospitals: Results from the TransFLUas influenza transmission study

por Tamò, Raphaël, Turk, Teja, Böni, Jürg, Kouyos, Roger D., Schmutz, Stefan, Huber, Michael, Shah, Cyril, Bischoff-Ferrari, Heike A., Distler, Oliver, Battegay, Edouard, Giovanoli, Pietro, Guckenberger, Matthias, Kohler, Malcolm, Müller, Rouven, Petry, Heidi, Ruschitzka, Frank, McGeer, Allison, Sax, Hugo, Weber, Rainer, Trkola, Alexandra, Kuster, Stefan P.
Publicado 2022

Assessing immunogenicity barriers of the HIV-1 envelope trimer

por Maliqi, Liridona, Friedrich, Nikolas, Glögl, Matthias, Schmutz, Stefan, Schmidt, Daniel, Rusert, Peter, Schanz, Merle, Zaheri, Maryam, Pasin, Chloé, Niklaus, Cyrille, Foulkes, Caio, Reinberg, Thomas, Dreier, Birgit, Abela, Irene, Peterhoff, David, Hauser, Alexandra, Kouyos, Roger D., Günthard, Huldrych F., van Gils, Marit J., Sanders, Rogier W., Wagner, Ralf, Plückthun, Andreas, Trkola, Alexandra
Publicado 2023

Antibodies from convalescent plasma promote SARS-CoV-2 clearance in individuals with and without endogenous antibody response

por Marconato, Maddalena, Abela, Irene A., Hauser, Anthony, Schwarzmüller, Magdalena, Katzensteiner, Rheliana, Braun, Dominique L., Epp, Selina, Audigé, Annette, Weber, Jacqueline, Rusert, Peter, Schindler, Eméry, Pasin, Chloé, West, Emily, Böni, Jürg, Kufner, Verena, Huber, Michael, Zaheri, Maryam, Schmutz, Stefan, Frey, Beat M., Kouyos, Roger D., Günthard, Huldrych F., Manz, Markus G., Trkola, Alexandra
Publicado 2022

Multifactorial seroprofiling dissects the contribution of pre-existing human coronaviruses responses to SARS-CoV-2 immunity

por Abela, Irene A., Pasin, Chloé, Schwarzmüller, Magdalena, Epp, Selina, Sickmann, Michèle E., Schanz, Merle M., Rusert, Peter, Weber, Jacqueline, Schmutz, Stefan, Audigé, Annette, Maliqi, Liridona, Hunziker, Annika, Hesselman, Maria C., Niklaus, Cyrille R., Gottschalk, Jochen, Schindler, Eméry, Wepf, Alexander, Karrer, Urs, Wolfensberger, Aline, Rampini, Silvana K., Meyer Sauteur, Patrick M., Berger, Christoph, Huber, Michael, Böni, Jürg, Braun, Dominique L., Marconato, Maddalena, Manz, Markus G., Frey, Beat M., Günthard, Huldrych F., Kouyos, Roger D., Trkola, Alexandra
Publicado 2021

Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data

por Nadeau, Sarah A., Vaughan, Timothy G., Beckmann, Christiane, Topolsky, Ivan, Chen, Chaoran, Hodcroft, Emma, Schär, Tobias, Nissen, Ina, Santacroce, Natascha, Burcklen, Elodie, Ferreira, Pedro, Jablonski, Kim Philipp, Posada-Céspedes, Susana, Capece, Vincenzo, Seidel, Sophie, Santamaria de Souza, Noemi, Martinez-Gomez, Julia M., Cheng, Phil, Bosshard, Philipp P., Levesque, Mitchell P., Kufner, Verena, Schmutz, Stefan, Zaheri, Maryam, Huber, Michael, Trkola, Alexandra, Cordey, Samuel, Laubscher, Florian, Gonçalves, Ana Rita, Aeby, Sébastien, Pillonel, Trestan, Jacot, Damien, Bertelli, Claire, Greub, Gilbert, Leuzinger, Karoline, Stange, Madlen, Mari, Alfredo, Roloff, Tim, Seth-Smith, Helena, Hirsch, Hans H., Egli, Adrian, Redondo, Maurice, Kobel, Olivier, Noppen, Christoph, du Plessis, Louis, Beerenwinkel, Niko, Neher, Richard A., Beisel, Christian, Stadler, Tanja
Publicado 2022