Letting the data speak for themselves: a fully Bayesian approach to transcriptome assembly

por Schulz, Marcel H
Publicado 2014

Efficiently quantifying DNA methylation for bulk- and single-cell bisulfite data

por Fischer, Jonas, Schulz, Marcel H
Publicado 2023

On the problem of confounders in modeling gene expression

por Schmidt, Florian, Schulz, Marcel H
Publicado 2019

Fast detection of differential chromatin domains with SCIDDO

por Ebert, Peter, Schulz, Marcel H
Publicado 2020

Informed kmer selection for de novo transcriptome assembly

por Durai, Dilip A., Schulz, Marcel H.
Publicado 2016

In silico read normalization using set multi-cover optimization

por Durai, Dilip A, Schulz, Marcel H
Publicado 2018

Improving in-silico normalization using read weights

por Durai, Dilip A., Schulz, Marcel H.
Publicado 2019

Widespread effects of DNA methylation and intra-motif dependencies revealed by novel transcription factor binding models

por Grau, Jan, Schmidt, Florian, Schulz, Marcel H
Publicado 2023

Automated analysis of small RNA datasets with RAPID

por Karunanithi, Sivarajan, Simon, Martin, Schulz, Marcel H.
Publicado 2019

Integrative prediction of gene expression with chromatin accessibility and conformation data

por Schmidt, Florian, Kern, Fabian, Schulz, Marcel H.
Publicado 2020

Improved linking of motifs to their TFs using domain information

por Baumgarten, Nina, Schmidt, Florian, Schulz, Marcel H
Publicado 2020

Predicting transcription factor binding using ensemble random forest models

por Behjati Ardakani, Fatemeh, Schmidt, Florian, Schulz, Marcel H.
Publicado 2019

Estimation of pairwise sequence similarity of mammalian enhancers with word neighbourhood counts

por Göke, Jonathan, Schulz, Marcel H., Lasserre, Julia, Vingron, Martin
Publicado 2012

JAMI: fast computation of conditional mutual information for ceRNA network analysis

por Hornakova, Andrea, List, Markus, Vreeken, Jilles, Schulz, Marcel H
Publicado 2018

Exact score distribution computation for ontological similarity searches

por Schulz, Marcel H, Köhler, Sebastian, Bauer, Sebastian, Robinson, Peter N
Publicado 2011

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

por Schulz, Marcel H., Zerbino, Daniel R., Vingron, Martin, Birney, Ewan
Publicado 2012

Large-scale inference of competing endogenous RNA networks with sparse partial correlation

por List, Markus, Dehghani Amirabad, Azim, Kostka, Dennis, Schulz, Marcel H
Publicado 2019

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

por Ye, Kai, Schulz, Marcel H., Long, Quan, Apweiler, Rolf, Ning, Zemin
Publicado 2009

A general concept for consistent documentation of computational analyses

por Ebert, Peter, Müller, Fabian, Nordström, Karl, Lengauer, Thomas, Schulz, Marcel H.
Publicado 2015

TEPIC 2—an extended framework for transcription factor binding prediction and integrative epigenomic analysis

por Schmidt, Florian, Kern, Fabian, Ebert, Peter, Baumgarten, Nina, Schulz, Marcel H
Publicado 2019