Nanopore direct RNA sequencing maps the complexity of Arabidopsis mRNA processing and m(6)A modification

por Parker, Matthew T, Knop, Katarzyna, Sherwood, Anna V, Schurch, Nicholas J, Mackinnon, Katarzyna, Gould, Peter D, Hall, Anthony JW, Barton, Geoffrey J, Simpson, Gordon G
Publicado 2020

Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment

por Gierliński, Marek, Cole, Christian, Schofield, Pietà, Schurch, Nicholas J., Sherstnev, Alexander, Singh, Vijender, Wrobel, Nicola, Gharbi, Karim, Simpson, Gordon, Owen-Hughes, Tom, Blaxter, Mark, Barton, Geoffrey J.
Publicado 2015

Improved Annotation of 3′ Untranslated Regions and Complex Loci by Combination of Strand-Specific Direct RNA Sequencing, RNA-Seq and ESTs

por Schurch, Nicholas J., Cole, Christian, Sherstnev, Alexander, Song, Junfang, Duc, Céline, Storey, Kate G., McLean, W. H. Irwin, Brown, Sara J., Simpson, Gordon G., Barton, Geoffrey J.
Publicado 2014

How many biological replicates are needed in an RNA-seq experiment and which differential expression tool should you use?

por Schurch, Nicholas J., Schofield, Pietá, Gierliński, Marek, Cole, Christian, Sherstnev, Alexander, Singh, Vijender, Wrobel, Nicola, Gharbi, Karim, Simpson, Gordon G., Owen-Hughes, Tom, Blaxter, Mark, Barton, Geoffrey J.
Publicado 2016

Filaggrin-stratified transcriptomic analysis of pediatric skin identifies mechanistic pathways in patients with atopic dermatitis

por Cole, Christian, Kroboth, Karin, Schurch, Nicholas J., Sandilands, Aileen, Sherstnev, Alexander, O'Regan, Grainne M., Watson, Rosemarie M., Irwin McLean, W.H., Barton, Geoffrey J., Irvine, Alan D., Brown, Sara J.
Publicado 2014