Misty Mountain clustering: application to fast unsupervised flow cytometry gating

por Sugár, István P, Sealfon, Stuart C
Publicado 2010

Increasing Consistency of Disease Biomarker Prediction Across Datasets

por Chikina, Maria D., Sealfon, Stuart C.
Publicado 2014

Multi-Scale Stochastic Simulation of Diffusion-Coupled Agents and Its Application to Cell Culture Simulation

por Shimoni, Yishai, Nudelman, German, Hayot, Fernand, Sealfon, Stuart C.
Publicado 2011

BioPP: a tool for web-publication of biological networks

por Viswanathan, Ganesh A, Nudelman, German, Patil, Sonali, Sealfon, Stuart C
Publicado 2007

Plato's Cave Algorithm: Inferring Functional Signaling Networks from Early Gene Expression Shadows

por Shimoni, Yishai, Fink, Marc Y., Choi, Soon-gang, Sealfon, Stuart C.
Publicado 2010

Getting Started in Biological Pathway Construction and Analysis

por Viswanathan, Ganesh A, Seto, Jeremy, Patil, Sonali, Nudelman, German, Sealfon, Stuart C
Publicado 2008

Noise propagation through extracellular signaling leads to fluctuations in gene expression

por Tabbaa, Omar P, Nudelman, German, Sealfon, Stuart C, Hayot, Fernand, Jayaprakash, Ciriyam
Publicado 2013

Pathway-Level Information ExtractoR (PLIER) for gene expression data

por Mao, Weiguang, Zaslavsky, Elena, Hartmann, Boris M., Sealfon, Stuart C., Chikina, Maria
Publicado 2019

Method for multiplex cellular detection of mRNAs using quantum dot fluorescent in situ hybridization

por Chan, PokMan, Yuen, Tony, Ruf, Frederique, Gonzalez-Maeso, Javier, Sealfon, Stuart C.
Publicado 2005

Signaling network of dendritic cells in response to pathogens: a community-input supported knowledgebase

por Patil, Sonali, Pincas, Hanna, Seto, Jeremy, Nudelman, German, Nudelman, Irina, Sealfon, Stuart C
Publicado 2010

Combinatorial Cytokine Code Generates Anti-Viral State in Dendritic Cells

por Hartmann, Boris M., Marjanovic, Nada, Nudelman, German, Moran, Thomas M., Sealfon, Stuart C.
Publicado 2014

Comparative analysis of anti-viral transcriptomics reveals novel effects of influenza immune antagonism

por Thakar, Juilee, Hartmann, Boris M., Marjanovic, Nada, Sealfon, Stuart C., Kleinstein, Steven H.
Publicado 2015

Interferon-β Pretreatment of Conventional and Plasmacytoid Human Dendritic Cells Enhances Their Activation by Influenza Virus

por Phipps-Yonas, Hannah, Seto, Jeremy, Sealfon, Stuart C., Moran, Thomas M., Fernandez-Sesma, Ana
Publicado 2008

Deciphering the combinatorial landscape of immunity

por Cappuccio, Antonio, Jensen, Shane T, Hartmann, Boris M, Sealfon, Stuart C, Soumelis, Vassili, Zaslavsky, Elena
Publicado 2020

MOCCASIN: converting MATLAB ODE models to SBML

por Gómez, Harold F., Hucka, Michael, Keating, Sarah M., Nudelman, German, Iber, Dagmar, Sealfon, Stuart C.
Publicado 2016

Benchmarking transcriptional host response signatures for infection diagnosis

por Chawla, Daniel G., Cappuccio, Antonio, Tamminga, Andrea, Sealfon, Stuart C., Zaslavsky, Elena, Kleinstein, Steven H.
Publicado 2022

High resolution annotation of zebrafish transcriptome using long-read sequencing

por Nudelman, German, Frasca, Antonio, Kent, Brandon, Sadler, Kirsten C., Sealfon, Stuart C., Walsh, Martin J., Zaslavsky, Elena
Publicado 2018

Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection

por Zaslavsky, Elena, Nudelman, German, Marquez, Susanna, Hershberg, Uri, Hartmann, Boris M, Thakar, Juilee, Sealfon, Stuart C, Kleinstein, Steven H
Publicado 2013

Tellurium notebooks—An environment for reproducible dynamical modeling in systems biology

por Medley, J. Kyle, Choi, Kiri, König, Matthias, Smith, Lucian, Gu, Stanley, Hellerstein, Joseph, Sealfon, Stuart C., Sauro, Herbert M.
Publicado 2018

Diverse effector and regulatory functions of fibro/adipogenic progenitors during skeletal muscle fibrosis in muscular dystrophy

por Wang, Xingyu, Chen, Jianming, Homma, Sachiko T., Wang, Yinhang, Smith, Gregory R., Ruf-Zamojski, Frederique, Sealfon, Stuart C., Zhou, Lan
Publicado 2022