Interpretable and context-free deconvolution of multi-scale whole transcriptomic data with UniCell deconvolve

por Charytonowicz, Daniel, Brody, Rachel, Sebra, Robert
Publicado 2023

51. BRAIN METASTASES FROM ENDOMETRIAL CARCINOMA: TUMOR GENETIC ALTERATIONS IN A CASE SERIES AND META-ANALYSIS

por Chapman, Emily K, Tsankova, Nadejda, Sebra, Robert, Germano, Isabelle M
Publicado 2020

Genome-Wide Biases in the Rate and Molecular Spectrum of Spontaneous Mutations in Vibrio cholerae and Vibrio fischeri

por Dillon, Marcus M., Sung, Way, Sebra, Robert, Lynch, Michael, Cooper, Vaughn S.
Publicado 2017

Integration of Single-Cell Transcriptomics With a High Throughput Functional Screening Assay to Resolve Cell Type, Growth Kinetics, and Stemness Heterogeneity Within the Comma-1D C...

por Dave, Arpit, Nekritz, Erin, Charytonowicz, Daniel, Beaumont, Michael, Smith, Melissa, Beaumont, Kristin, Silva, Jose, Sebra, Robert
Publicado 2022

Using single-cell multiple omics approaches to resolve tumor heterogeneity

por Ortega, Michael A., Poirion, Olivier, Zhu, Xun, Huang, Sijia, Wolfgruber, Thomas K., Sebra, Robert, Garmire, Lana X.
Publicado 2017

Treatment-associated TP53 DNA-binding domain missense mutations in the pathogenesis of secondary gliosarcoma

por Pain, Margaret, Wang, Huaien, Lee, Eunjee, Strahl, Maya, Hamou, Wissam, Sebra, Robert, Zhu, Jun, Yong, Raymund L.
Publicado 2017

Parafibromin Abnormalities in Ossifying Fibroma

por Costa-Guda, Jessica, Pandya, Chetanya, Strahl, Maya, Taik, Patricia, Sebra, Robert, Chen, Rong, Uzilov, Andrew V, Arnold, Andrew
Publicado 2021

The Breast Cancer Single-Cell Atlas: Defining cellular heterogeneity within model cell lines and primary tumors to inform disease subtype, stemness, and treatment options

por Dave, Arpit, Charytonowicz, Daniel, Francoeur, Nancy J., Beaumont, Michael, Beaumont, Kristin, Schmidt, Hank, Zeleke, Tizita, Silva, Jose, Sebra, Robert
Publicado 2023

Capture of complete ciliate chromosomes in single sequencing reads reveals widespread chromosome isoforms

por Lindblad, Kelsi A., Pathmanathan, Jananan S., Moreira, Sandrine, Bracht, John R., Sebra, Robert P., Hutton, Elizabeth R., Landweber, Laura F.
Publicado 2019

Tumoral and immune heterogeneity in an anti-PD-1-responsive glioblastoma: a case study

por Restrepo, Paula, Yong, Raymund, Laface, Ilaria, Tsankova, Nadejda, Nael, Kambiz, Akturk, Guray, Sebra, Robert, Gnjatic, Sacha, Hormigo, Adilia, Losic, Bojan
Publicado 2020

Limited Mitochondrial Activity Coupled With Strong Expression of CD34, CD90 and EPCR Determines the Functional Fitness of ex vivo Expanded Human Hematopoietic Stem Cells

por Papa, Luena, Djedaini, Mansour, Martin, Tiphaine C., Zangui, Mahtab, Beaumont, Kristin G., Sebra, Robert, Parsons, Ramon, Schaniel, Christoph, Hoffman, Ronald
Publicado 2020

Single molecule real-time sequencing of Xanthomonas oryzae genomes reveals a dynamic structure and complex TAL (transcription activator-like) effector gene relationships

por Booher, Nicholas J., Carpenter, Sara C. D., Sebra, Robert P., Wang, Li, Salzberg, Steven L., Leach, Jan E., Bogdanove, Adam J.
Publicado 2015

Single-Molecule Real-Time (SMRT) Full-Length RNA-Sequencing Reveals Novel and Distinct mRNA Isoforms in Human Bone Marrow Cell Subpopulations

por Deslattes Mays, Anne, Schmidt, Marcel, Graham, Garrett, Tseng, Elizabeth, Baybayan, Primo, Sebra, Robert, Sanda, Miloslav, Mazarati, Jean-Baptiste, Riegel, Anna, Wellstein, Anton
Publicado 2019

Quantitative and multiplexed DNA methylation analysis using long-read single-molecule real-time bisulfite sequencing (SMRT-BS)

por Yang, Yao, Sebra, Robert, Pullman, Benjamin S, Qiao, Wanqiong, Peter, Inga, Desnick, Robert J, Geyer, C Ronald, DeCoteau, John F, Scott, Stuart A
Publicado 2015

Long read, isoform aware sequencing of mouse nucleus accumbens after chronic cocaine treatment

por Estill, Molly, Ribeiro, Efrain, Francoeur, Nancy J., Smith, Melissa L., Sebra, Robert, Yeh, Szu-Ying, Cunningham, Ashley M., Nestler, Eric J., Shen, Li
Publicado 2021

Cell-to-Cell Variation in Defective Virus Expression and Effects on Host Responses during Influenza Virus Infection

por Wang, Chang, Forst, Christian V., Chou, Tsui-wen, Geber, Adam, Wang, Minghui, Hamou, Wissam, Smith, Melissa, Sebra, Robert, Zhang, Bin, Zhou, Bin, Ghedin, Elodie
Publicado 2020

Complete Genome Sequence of KPC-Producing Klebsiella pneumoniae Strain CAV1193

por Sheppard, Anna E., Stoesser, Nicole, Sebra, Robert, Kasarskis, Andrew, Deikus, Gintaras, Anson, Luke, Walker, A. Sarah, Peto, Tim E., Crook, Derrick W., Mathers, Amy J.
Publicado 2016

Mce3R Stress-Resistance Pathway Is Vulnerable to Small-Molecule Targeting That Improves Tuberculosis Drug Activities

por Yang, Xinxin, Yuan, Tianao, Ma, Rui, Chacko, Kieran I., Smith, Melissa, Deikus, Gintaras, Sebra, Robert, Kasarskis, Andrew, van Bakel, Harm, Franzblau, Scott G., Sampson, Nicole S.
Publicado 2019

Epigenetic preconditioning with decitabine sensitizes glioblastoma to temozolomide via induction of MLH1

por Gallitto, Matthew, Cheng He, Rossana, Inocencio, Julio F., Wang, Huaien, Zhang, Yizhou, Deikus, Gintaras, Wasserman, Isaac, Strahl, Maya, Smith, Melissa, Sebra, Robert, Yong, Raymund L.
Publicado 2020

Intrahost Dynamics of Antiviral Resistance in Influenza A Virus Reflect Complex Patterns of Segment Linkage, Reassortment, and Natural Selection

por Rogers, Matthew B., Song, Timothy, Sebra, Robert, Greenbaum, Benjamin D., Hamelin, Marie-Eve, Fitch, Adam, Twaddle, Alan, Cui, Lijia, Holmes, Edward C., Boivin, Guy, Ghedin, Elodie
Publicado 2015