Fast activation maximization for molecular sequence design

por Linder, Johannes, Seelig, Georg
Publicado 2021

Plasmid-derived DNA Strand Displacement Gates for Implementing Chemical Reaction Networks

por Chen, Yuan-Jyue, Rao, Sundipta D., Seelig, Georg
Publicado 2015

CellMeSH: probabilistic cell-type identification using indexed literature

por Mao, Shunfu, Zhang, Yue, Seelig, Georg, Kannan, Sreeram
Publicado 2021

A Generative Neural Network for Maximizing Fitness and Diversity of Synthetic DNA and Protein Sequences

por Linder, Johannes, Bogard, Nicholas, Rosenberg, Alexander B., Seelig, Georg
Publicado 2020

Deciphering the impact of genetic variation on human polyadenylation using APARENT2

por Linder, Johannes, Koplik, Samantha E., Kundaje, Anshul, Seelig, Georg
Publicado 2022

Scalable preprocessing for sparse scRNA-seq data exploiting prior knowledge

por Mukherjee, Sumit, Zhang, Yue, Fan, Joshua, Seelig, Georg, Kannan, Sreeram
Publicado 2018

Rewiring MAP kinases in Saccharomyces cerevisiae to regulate novel targets through ubiquitination

por Groves, Benjamin, Khakhar, Arjun, Nadel, Cory M, Gardner, Richard G, Seelig, Georg
Publicado 2016

Modular, robust, and extendible multicellular circuit design in yeast

por Carignano, Alberto, Chen, Dai Hua, Mallory, Cannon, Wright, R Clay, Seelig, Georg, Klavins, Eric
Publicado 2022

Deep learning of the regulatory grammar of yeast 5′ untranslated regions from 500,000 random sequences

por Cuperus, Josh T., Groves, Benjamin, Kuchina, Anna, Rosenberg, Alexander B., Jojic, Nebojsa, Fields, Stanley, Seelig, Georg
Publicado 2017

Massively parallel protein-protein interaction measurement by sequencing (MP3-seq) enables rapid screening of protein heterodimers

por Baryshev, Alexander, La Fleur, Alyssa, Groves, Benjamin, Michel, Cirstyn, Baker, David, Ljubetič, Ajasja, Seelig, Georg
Publicado 2023

Computing in mammalian cells with nucleic acid strand exchange

por Groves, Benjamin, Chen, Yuan-Jyue, Zurla, Chiara, Pochekailov, Sergii, Kirschman, Jonathan L., Santangelo, Philip J., Seelig, Georg
Publicado 2015

A nanopore interface for higher bandwidth DNA computing

por Zhang, Karen, Chen, Yuan-Jyue, Wilde, Delaney, Doroschak, Kathryn, Strauss, Karin, Ceze, Luis, Seelig, Georg, Nivala, Jeff
Publicado 2022

Molecular-level similarity search brings computing to DNA data storage

por Bee, Callista, Chen, Yuan-Jyue, Queen, Melissa, Ward, David, Liu, Xiaomeng, Organick, Lee, Seelig, Georg, Strauss, Karin, Ceze, Luis
Publicado 2021

DNA assembly for nanopore data storage readout

por Lopez, Randolph, Chen, Yuan-Jyue, Dumas Ang, Siena, Yekhanin, Sergey, Makarychev, Konstantin, Racz, Miklos Z, Seelig, Georg, Strauss, Karin, Ceze, Luis
Publicado 2019

Quantifying molecular bias in DNA data storage

por Chen, Yuan-Jyue, Takahashi, Christopher N., Organick, Lee, Bee, Callista, Ang, Siena Dumas, Weiss, Patrick, Peck, Bill, Seelig, Georg, Ceze, Luis, Strauss, Karin
Publicado 2020

Degenerate minigene library analysis enables identification of altered branch point utilization by mutant splicing factor 3B1 (SF3B1)

por Gupta, Abhishek K, Murthy, Tushar, Paul, Kiran V, Ramirez, Oscar, Fisher, Joseph B, Rao, Sridhar, Rosenberg, Alexander B, Seelig, Georg, Minella, Alex C, Pillai, Manoj M
Publicado 2019

DNA storage in thermoresponsive microcapsules for repeated random multiplexed data access

por Bögels, Bas W. A., Nguyen, Bichlien H., Ward, David, Gascoigne, Levena, Schrijver, David P., Makri Pistikou, Anna-Maria, Joesaar, Alex, Yang, Shuo, Voets, Ilja K., Mulder, Willem J. M., Phillips, Andrew, Mann, Stephen, Seelig, Georg, Strauss, Karin, Chen, Yuan-Jyue, de Greef, Tom F. A.
Publicado 2023

A comprehensive analysis of gene expression changes in a high replicate and open-source dataset of differentiating hiPSC-derived cardiomyocytes

por Grancharova, Tanya, Gerbin, Kaytlyn A., Rosenberg, Alexander B., Roco, Charles M., Arakaki, Joy E., DeLizo, Colette M., Dinh, Stephanie Q., Donovan-Maiye, Rory M., Hirano, Matthew, Nelson, Angelique M., Tang, Joyce, Theriot, Julie A., Yan, Calysta, Menon, Vilas, Palecek, Sean P., Seelig, Georg, Gunawardane, Ruwanthi N.
Publicado 2021

Spatial and cell-type transcriptional landscape of human cerebellar development

por Aldinger, Kimberly A., Thomson, Zach, Phelps, Ian G., Haldipur, Parthiv, Deng, Mei, Timms, Andrew E., Hirano, Matthew, Santpere, Gabriel, Roco, Charles, Rosenberg, Alexander B., Lorente-Galdos, Belen, Gulden, Forrest O., O’Day, Diana, Overman, Lynne M., Lisgo, Steven N., Alexandre, Paula, Sestan, Nenad, Doherty, Dan, Dobyns, William B., Seelig, Georg, Glass, Ian A., Millen, Kathleen J.
Publicado 2021