Fast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIX

por Hanghøj, Kristian, Seguin-Orlando, Andaine, Schubert, Mikkel, Madsen, Tobias, Pedersen, Jakob Skou, Willerslev, Eske, Orlando, Ludovic
Publicado 2016

Transcriptome and Genome Size Analysis of the Venus Flytrap

por Jensen, Michael Krogh, Vogt, Josef Korbinian, Bressendorff, Simon, Seguin-Orlando, Andaine, Petersen, Morten, Sicheritz-Pontén, Thomas, Mundy, John
Publicado 2015

Identifying a living great-grandson of the Lakota Sioux leader Tatanka Iyotake (Sitting Bull)

por Moltke, Ida, Korneliussen, Thorfinn Sand, Seguin-Orlando, Andaine, Moreno-Mayar, J. Víctor, LaPointe, Ernie, Billeck, William, Willerslev, Eske
Publicado 2021

Ligation Bias in Illumina Next-Generation DNA Libraries: Implications for Sequencing Ancient Genomes

por Seguin-Orlando, Andaine, Schubert, Mikkel, Clary, Joel, Stagegaard, Julia, Alberdi, Maria T., Prado, José Luis, Prieto, Alfredo, Willerslev, Eske, Orlando, Ludovic
Publicado 2013

FANCD2 binding identifies conserved fragile sites at large transcribed genes in avian cells

por Pentzold, Constanze, Shah, Shiraz Ali, Hansen, Niels Richard, Le Tallec, Benoît, Seguin-Orlando, Andaine, Debatisse, Michelle, Lisby, Michael, Oestergaard, Vibe H
Publicado 2018

No particular genomic features underpin the dramatic economic consequences of 17(th) century plague epidemics in Italy

por Seguin-Orlando, Andaine, Costedoat, Caroline, Der Sarkissian, Clio, Tzortzis, Stéfan, Kamel, Célia, Telmon, Norbert, Dalén, Love, Thèves, Catherine, Signoli, Michel, Orlando, Ludovic
Publicado 2021

Genomic Characterization of a South American Phytophthora Hybrid Mandates Reassessment of the Geographic Origins of Phytophthora infestans

por Martin, Michael D., Vieira, Filipe G., Ho, Simon Y.W., Wales, Nathan, Schubert, Mikkel, Seguin-Orlando, Andaine, Ristaino, Jean B., Gilbert, M. Thomas P.
Publicado 2016

Improved de novo genomic assembly for the domestic donkey

por Renaud, Gabriel, Petersen, Bent, Seguin-Orlando, Andaine, Bertelsen, Mads Frost, Waller, Andrew, Newton, Richard, Paillot, Romain, Bryant, Neil, Vaudin, Mark, Librado, Pablo, Orlando, Ludovic
Publicado 2018

Early pastoral economies along the Ancient Silk Road: Biomolecular evidence from the Alay Valley, Kyrgyzstan

por Taylor, William, Shnaider, Svetlana, Abdykanova, Aida, Fages, Antoine, Welker, Frido, Irmer, Franziska, Seguin-Orlando, Andaine, Khan, Naveed, Douka, Katerina, Kolobova, Ksenia, Orlando, Ludovic, Krivoshapkin, Andrei, Boivin, Nicole
Publicado 2018

Evaluating the impact of domestication and captivity on the horse gut microbiome

por Metcalf, Jessica L., Song, Se Jin, Morton, James T., Weiss, Sophie, Seguin-Orlando, Andaine, Joly, Frédéric, Feh, Claudia, Taberlet, Pierre, Coissac, Eric, Amir, Amnon, Willerslev, Eske, Knight, Rob, McKenzie, Valerie, Orlando, Ludovic
Publicado 2017

Mitochondrial Phylogenomics of Modern and Ancient Equids

por Vilstrup, Julia T., Seguin-Orlando, Andaine, Stiller, Mathias, Ginolhac, Aurelien, Raghavan, Maanasa, Nielsen, Sandra C. A., Weinstock, Jacobo, Froese, Duane, Vasiliev, Sergei K., Ovodov, Nikolai D., Clary, Joel, Helgen, Kristofer M., Fleischer, Robert C., Cooper, Alan, Shapiro, Beth, Orlando, Ludovic
Publicado 2013

Less effective selection leads to larger genomes

por Lefébure, Tristan, Morvan, Claire, Malard, Florian, François, Clémentine, Konecny-Dupré, Lara, Guéguen, Laurent, Weiss-Gayet, Michèle, Seguin-Orlando, Andaine, Ermini, Luca, Sarkissian, Clio Der, Charrier, N. Pierre, Eme, David, Mermillod-Blondin, Florian, Duret, Laurent, Vieira, Cristina, Orlando, Ludovic, Douady, Christophe Jean
Publicado 2017

Reconstructing genome evolution in historic samples of the Irish potato famine pathogen

por Martin, Michael D., Cappellini, Enrico, Samaniego, Jose A., Zepeda, M. Lisandra, Campos, Paula F., Seguin-Orlando, Andaine, Wales, Nathan, Orlando, Ludovic, Ho, Simon Y. W., Dietrich, Fred S., Mieczkowski, Piotr A., Heitman, Joseph, Willerslev, Eske, Krogh, Anders, Ristaino, Jean B., Gilbert, M. Thomas P.
Publicado 2013

Improving the extraction of ancient Yersinia pestis genomes from the dental pulp

por Clavel, Pierre, Louis, Lexane, Sarkissian, Clio Der, Thèves, Catherine, Gillet, Claudia, Chauvey, Lorelei, Tressières, Gaétan, Schiavinato, Stéphanie, Calvière-Tonasso, Laure, Telmon, Norbert, Clavel, Benoît, Jonvel, Richard, Tzortzis, Stéfan, Bouniol, Laetitia, Fémolant, Jean-Marc, Klunk, Jennifer, Poinar, Hendrik, Signoli, Michel, Costedoat, Caroline, Spyrou, Maria A., Seguin-Orlando, Andaine, Orlando, Ludovic
Publicado 2023

The Effects of Captivity on the Mammalian Gut Microbiome

por McKenzie, Valerie J., Song, Se Jin, Delsuc, Frédéric, Prest, Tiffany L., Oliverio, Angela M., Korpita, Timothy M., Alexiev, Alexandra, Amato, Katherine R., Metcalf, Jessica L., Kowalewski, Martin, Avenant, Nico L., Link, Andres, Di Fiore, Anthony, Seguin-Orlando, Andaine, Feh, Claudia, Orlando, Ludovic, Mendelson, Joseph R., Sanders, Jon, Knight, Rob
Publicado 2017

Modern human incursion into Neanderthal territories 54,000 years ago at Mandrin, France

por Slimak, Ludovic, Zanolli, Clément, Higham, Tom, Frouin, Marine, Schwenninger, Jean-Luc, Arnold, Lee J., Demuro, Martina, Douka, Katerina, Mercier, Norbert, Guérin, Gilles, Valladas, Hélène, Yvorra, Pascale, Giraud, Yves, Seguin-Orlando, Andaine, Orlando, Ludovic, Lewis, Jason E., Muth, Xavier, Camus, Hubert, Vandevelde, Ségolène, Buckley, Mike, Mallol, Carolina, Stringer, Chris, Metz, Laure
Publicado 2022

Pros and cons of methylation-based enrichment methods for ancient DNA

por Seguin-Orlando, Andaine, Gamba, Cristina, Sarkissian, Clio Der, Ermini, Luca, Louvel, Guillaume, Boulygina, Eugenia, Sokolov, Alexey, Nedoluzhko, Artem, Lorenzen, Eline D., Lopez, Patricio, McDonald, H. Gregory, Scott, Eric, Tikhonov, Alexei, Stafford,, Thomas W., Alfarhan, Ahmed H., Alquraishi, Saleh A., Al-Rasheid, Khaled A. S., Shapiro, Beth, Willerslev, Eske, Prokhortchouk, Egor, Orlando, Ludovic
Publicado 2015

DNA methylation-based profiling of horse archaeological remains for age-at-death and castration

por Liu, Xuexue, Seguin-Orlando, Andaine, Chauvey, Lorelei, Tressières, Gaëtan, Schiavinato, Stéphanie, Tonasso-Calvière, Laure, Aury, Jean-Marc, Perdereau, Aude, Wagner, Stefanie, Clavel, Pierre, Estrada, Oscar, Pan, Jianfei, Ma, Yuehui, Enk, Jacob, Devault, Alison, Klunk, Jennifer, Lepetz, Sébastien, Clavel, Benoit, Jiang, Lin, Wincker, Patrick, Collin, Yvette Running Horse, Sarkissian, Clio Der, Orlando, Ludovic
Publicado 2023

Ancient genomics

por Der Sarkissian, Clio, Allentoft, Morten E., Ávila-Arcos, María C., Barnett, Ross, Campos, Paula F., Cappellini, Enrico, Ermini, Luca, Fernández, Ruth, da Fonseca, Rute, Ginolhac, Aurélien, Hansen, Anders J., Jónsson, Hákon, Korneliussen, Thorfinn, Margaryan, Ashot, Martin, Michael D., Moreno-Mayar, J. Víctor, Raghavan, Maanasa, Rasmussen, Morten, Velasco, Marcela Sandoval, Schroeder, Hannes, Schubert, Mikkel, Seguin-Orlando, Andaine, Wales, Nathan, Gilbert, M. Thomas P., Willerslev, Eske, Orlando, Ludovic
Publicado 2015

Grey wolf genomic history reveals a dual ancestry of dogs

por Bergström, Anders, Stanton, David W. G., Taron, Ulrike H., Frantz, Laurent, Sinding, Mikkel-Holger S., Ersmark, Erik, Pfrengle, Saskia, Cassatt-Johnstone, Molly, Lebrasseur, Ophélie, Girdland-Flink, Linus, Fernandes, Daniel M., Ollivier, Morgane, Speidel, Leo, Gopalakrishnan, Shyam, Westbury, Michael V., Ramos-Madrigal, Jazmin, Feuerborn, Tatiana R., Reiter, Ella, Gretzinger, Joscha, Münzel, Susanne C., Swali, Pooja, Conard, Nicholas J., Carøe, Christian, Haile, James, Linderholm, Anna, Androsov, Semyon, Barnes, Ian, Baumann, Chris, Benecke, Norbert, Bocherens, Hervé, Brace, Selina, Carden, Ruth F., Drucker, Dorothée G., Fedorov, Sergey, Gasparik, Mihály, Germonpré, Mietje, Grigoriev, Semyon, Groves, Pam, Hertwig, Stefan T., Ivanova, Varvara V., Janssens, Luc, Jennings, Richard P., Kasparov, Aleksei K., Kirillova, Irina V., Kurmaniyazov, Islam, Kuzmin, Yaroslav V., Kosintsev, Pavel A., Lázničková-Galetová, Martina, Leduc, Charlotte, Nikolskiy, Pavel, Nussbaumer, Marc, O’Drisceoil, Cóilín, Orlando, Ludovic, Outram, Alan, Pavlova, Elena Y., Perri, Angela R., Pilot, Małgorzata, Pitulko, Vladimir V., Plotnikov, Valerii V., Protopopov, Albert V., Rehazek, André, Sablin, Mikhail, Seguin-Orlando, Andaine, Storå, Jan, Verjux, Christian, Zaibert, Victor F., Zazula, Grant, Crombé, Philippe, Hansen, Anders J., Willerslev, Eske, Leonard, Jennifer A., Götherström, Anders, Pinhasi, Ron, Schuenemann, Verena J., Hofreiter, Michael, Gilbert, M. Thomas P., Shapiro, Beth, Larson, Greger, Krause, Johannes, Dalén, Love, Skoglund, Pontus
Publicado 2022