Modeling Protein Complexes Using Restraints from Crosslinking Mass Spectrometry

por Bullock, Joshua Matthew Allen, Sen, Neeladri, Thalassinos, Konstantinos, Topf, Maya
Publicado 2018

Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs

por Sen, Neeladri, Anishchenko, Ivan, Bordin, Nicola, Sillitoe, Ian, Velankar, Sameer, Baker, David, Orengo, Christine
Publicado 2022

The impact of structural bioinformatics tools and resources on SARS-CoV-2 research and therapeutic strategies

por Waman, Vaishali P, Sen, Neeladri, Varadi, Mihaly, Daina, Antoine, Wodak, Shoshana J, Zoete, Vincent, Velankar, Sameer, Orengo, Christine
Publicado 2020

CATHe: detection of remote homologues for CATH superfamilies using embeddings from protein language models

por Nallapareddy, Vamsi, Bordin, Nicola, Sillitoe, Ian, Heinzinger, Michael, Littmann, Maria, Waman, Vaishali P, Sen, Neeladri, Rost, Burkhard, Orengo, Christine
Publicado 2023

Predicting and designing therapeutics against the Nipah virus

por Sen, Neeladri, Kanitkar, Tejashree Rajaram, Roy, Ankit Animesh, Soni, Neelesh, Amritkar, Kaustubh, Supekar, Shreyas, Nair, Sanjana, Singh, Gulzar, Madhusudhan, M. S.
Publicado 2019

AlphaFold2 reveals commonalities and novelties in protein structure space for 21 model organisms

por Bordin, Nicola, Sillitoe, Ian, Nallapareddy, Vamsi, Rauer, Clemens, Lam, Su Datt, Waman, Vaishali P., Sen, Neeladri, Heinzinger, Michael, Littmann, Maria, Kim, Stephanie, Velankar, Sameer, Steinegger, Martin, Rost, Burkhard, Orengo, Christine
Publicado 2023

CATH: increased structural coverage of functional space

por Sillitoe, Ian, Bordin, Nicola, Dawson, Natalie, Waman, Vaishali P, Ashford, Paul, Scholes, Harry M, Pang, Camilla S M, Woodridge, Laurel, Rauer, Clemens, Sen, Neeladri, Abbasian, Mahnaz, Le Cornu, Sean, Lam, Su Datt, Berka, Karel, Varekova, Ivana Hutařová, Svobodova, Radka, Lees, Jon, Orengo, Christine A
Publicado 2020