An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

por Fadrosh, Douglas W, Ma, Bing, Gajer, Pawel, Sengamalay, Naomi, Ott, Sandra, Brotman, Rebecca M, Ravel, Jacques
Publicado 2014

Detection of HHV-6B in post-mortem central nervous system tissue of a post-bone marrow transplant recipient: a multi-virus array analysis

por Yao, Karen, Akyani, Nahid, Donati, Donatella, Sengamalay, Naomi, Fotheringham, Julie, Ghedin, Elodie, Bishop, Michael, Barrett, John, Kashanchi, Fatah, Jacobson, Steven
Publicado 2006

Whole-Genome Sequences of Burkholderia pseudomallei Isolates Exhibiting Decreased Meropenem Susceptibility

por Price, Erin P., Smith, Melissa Laird, Paxinos, Ellen E., Tallon, Luke J., Sadzewicz, Lisa, Sengamalay, Naomi, Baird, Robert W., Currie, Bart J., Sarovich, Derek S.
Publicado 2017

Viral genome sequencing by random priming methods

por Djikeng, Appolinaire, Halpin, Rebecca, Kuzmickas, Ryan, DePasse, Jay, Feldblyum, Jeremy, Sengamalay, Naomi, Afonso, Claudio, Zhang, Xinsheng, Anderson, Norman G, Ghedin, Elodie, Spiro, David J
Publicado 2008

Draft Genome Sequence of Mortierella alpina Isolate CDC-B6842

por Etienne, Kizee A., Chibucos, Marcus C., Su, Qi, Orvis, Joshua, Daugherty, Sean, Ott, Sandra, Sengamalay, Naomi A., Fraser, Claire M., Lockhart, Shawn R., Bruno, Vincent M.
Publicado 2014

Genome Sequences of Rhinovirus A Isolates from Wisconsin Pediatric Respiratory Studies

por Liggett, Stephen B., Bochkov, Yury A., Pappas, Tressa, Lemanske, Robert F., Gern, James E., Sengamalay, Naomi, Zhao, Xuechu, Su, Qi, Fraser, Claire M., Palmenberg, Ann C.
Publicado 2014

Genome Sequences of Rhinovirus B Isolates from Wisconsin Pediatric Respiratory Studies

por Liggett, Stephen B., Bochkov, Yury A., Pappas, Tressa, Lemanske, Robert F., Gern, James E., Sengamalay, Naomi, Zhao, Xuechu, Su, Qi, Fraser, Claire M., Palmenberg, Ann C.
Publicado 2014

Genome Sequences of Rhinovirus C Isolates from Wisconsin Pediatric Respiratory Studies

por Liggett, Stephen B., Bochkov, Yury A., Pappas, Tressa, Lemanske, Robert F., Gern, James E., Sengamalay, Naomi, Zhao, Xuechu, Su, Qi, Fraser, Claire M., Palmenberg, Ann C.
Publicado 2014

Correction: Molecular Epidemiology of A/H3N2 and A/H1N1 Influenza Virus during a Single Epidemic Season in the United States

por Nelson, Martha I., Edelman, Laurel, Spiro, David J., Boyne, Alex R., Bera, Jayati, Halpin, Rebecca, Sengamalay, Naomi, Ghedin, Elodie, Miller, Mark A., Simonsen, Lone, Viboud, Cecile, Holmes, Edward C.
Publicado 2008

Transcriptional Attenuation Controls Macrolide Inducible Efflux and Resistance in Streptococcus pneumoniae and in Other Gram-Positive Bacteria Containing mef/mel(msr(D)) Elements

por Chancey, Scott T., Bai, Xianhe, Kumar, Nikhil, Drabek, Elliott F., Daugherty, Sean C., Colon, Thomas, Ott, Sandra, Sengamalay, Naomi, Sadzewicz, Lisa, Tallon, Luke J., Fraser, Claire M., Tettelin, Hervé, Stephens, David S.
Publicado 2015

Analysis of complete genome sequence and major surface antigens of Neorickettsia helminthoeca, causative agent of salmon poisoning disease

por Lin, Mingqun, Bachman, Katherine, Cheng, Zhihui, Daugherty, Sean C., Nagaraj, Sushma, Sengamalay, Naomi, Ott, Sandra, Godinez, Al, Tallon, Luke J., Sadzewicz, Lisa, Fraser, Claire, Dunning Hotopp, Julie C., Rikihisa, Yasuko
Publicado 2017

Comparative Analysis of Genome of Ehrlichia sp. HF, a Model Bacterium to Study Fatal Human Ehrlichiosis

por Lin, Mingqun, Xiong, Qingming, Chung, Matthew, Daugherty, Sean C., Nagaraj, Sushma, Sengamalay, Naomi, Ott, Sandra, Godinez, Al, Tallon, Luke J., Sadzewicz, Lisa, Fraser, Claire, Dunning Hotopp, Julie C., Rikihisa, Yasuko
Publicado 2021

Multiple Reassortment Events in the Evolutionary History of H1N1 Influenza A Virus Since 1918

por Nelson, Martha I., Viboud, Cécile, Simonsen, Lone, Bennett, Ryan T., Griesemer, Sara B., St. George, Kirsten, Taylor, Jill, Spiro, David J., Sengamalay, Naomi A., Ghedin, Elodie, Taubenberger, Jeffery K., Holmes, Edward C.
Publicado 2008

Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys

por Ioannidis, Panagiotis, Lu, Yong, Kumar, Nikhil, Creasy, Todd, Daugherty, Sean, Chibucos, Marcus C, Orvis, Joshua, Shetty, Amol, Ott, Sandra, Flowers, Melissa, Sengamalay, Naomi, Tallon, Luke J, Pick, Leslie, Hotopp, Julie C Dunning
Publicado 2014

Simultaneous Transcriptional Profiling of Bacteria and Their Host Cells

por Humphrys, Michael S., Creasy, Todd, Sun, Yezhou, Shetty, Amol C., Chibucos, Marcus C., Drabek, Elliott F., Fraser, Claire M., Farooq, Umar, Sengamalay, Naomi, Ott, Sandy, Shou, Huizhong, Bavoil, Patrik M., Mahurkar, Anup, Myers, Garry S. A.
Publicado 2013

Concurrent Mutations in ATM and Genes Associated with Common γ Chain Signaling in Peripheral T Cell Lymphoma

por Simpson, Haley M., Khan, Rashid Z., Song, Chang, Sharma, Deva, Sadashivaiah, Kavitha, Furusawa, Aki, Liu, Xinyue, Nagaraj, Sushma, Sengamalay, Naomi, Sadzewicz, Lisa, Tallon, Luke J., Chen, Qing C., Livak, Ferenc, Rapoport, Aaron P., Kimball, Amy, Banerjee, Arnob
Publicado 2015

Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains

por Eppinger, Mark, Daugherty, Sean, Agrawal, Sonia, Galens, Kevin, Sengamalay, Naomi, Sadzewicz, Lisa, Tallon, Luke, Cebula, Thomas A., Mammel, Mark K., Feng, Peter, Soderlund, Robert, Tarr, Phillip I., DebRoy, Chitrita, Dudley, Edward G., Fraser, Claire M., Ravel, Jacques
Publicado 2013

Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus

por Nelson, Martha I, Simonsen, Lone, Viboud, Cecile, Miller, Mark A, Taylor, Jill, George, Kirsten St, Griesemer, Sara B, Ghedin, Elodie, Sengamalay, Naomi A, Spiro, David J, Volkov, Igor, Grenfell, Bryan T, Lipman, David J, Taubenberger, Jeffery K, Holmes, Edward C
Publicado 2006

Correction: Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus

por Nelson, Martha I, Simonsen, Lone, Viboud, Cecile, Miller, Mark A, Taylor, Jill, St. George, Kirsten, Griesemer, Sara B, Ghedin, Elodie, Sengamalay, Naomi A, Spiro, David J, Volkov, Igor, Grenfell, Brian T, Lipman, David J, Taubenberger, Jeffrey K, Holmes, Edward C
Publicado 2006

The Evolutionary Genetics and Emergence of Avian Influenza Viruses in Wild Birds

por Dugan, Vivien G., Chen, Rubing, Spiro, David J., Sengamalay, Naomi, Zaborsky, Jennifer, Ghedin, Elodie, Nolting, Jacqueline, Swayne, David E., Runstadler, Jonathan A., Happ, George M., Senne, Dennis A., Wang, Ruixue, Slemons, Richard D., Holmes, Edward C., Taubenberger, Jeffery K.
Publicado 2008