Undervalued Pseudo-nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers

por Mise, Kazumori, Masuda, Yoko, Senoo, Keishi, Itoh, Hideomi
Publicado 2021

Identification of Active Denitrifiers in Rice Paddy Soil by DNA- and RNA-Based Analyses

por Yoshida, Megumi, Ishii, Satoshi, Fujii, Daichi, Otsuka, Shigeto, Senoo, Keishi
Publicado 2012

Denitrification and Nitrate-Dependent Fe(II) Oxidation in Various Pseudogulbenkiania Strains

por Ishii, Satoshi, Joikai, Kazuki, Otsuka, Shigeto, Senoo, Keishi, Okabe, Satoshi
Publicado 2016

Phosphorus-mineralizing Communities Reflect Nutrient-Rich Characteristics in Japanese Arable Andisols

por Mise, Kazumori, Fujita, Kazuki, Kunito, Takashi, Senoo, Keishi, Otsuka, Shigeto
Publicado 2018

Prokaryotic Community Structure of Long-Term Fertilization Field Andisols in Central Japan

por Mise, Kazumori, Moro, Hitoshi, Kunito, Takashi, Senoo, Keishi, Otsuka, Shigeto
Publicado 2019

Mitigation of Paddy Field Soil Methane Emissions by Betaproteobacterium Azoarcus Inoculation of Rice Seeds

por Sakoda, Midori, Tokida, Takeshi, Sakai, Yoriko, Senoo, Keishi, Nishizawa, Tomoyasu
Publicado 2022

Identification and Phylogenetic Characterization of Cobalamin Biosynthetic Genes of Ensifer adhaerens

por Vu, Hoan Thi, Itoh, Hideomi, Ishii, Satoshi, Senoo, Keishi, Otsuka, Shigeto
Publicado 2013

Predominant but Previously-overlooked Prokaryotic Drivers of Reductive Nitrogen Transformation in Paddy Soils, Revealed by Metatranscriptomics

por Masuda, Yoko, Itoh, Hideomi, Shiratori, Yutaka, Isobe, Kazuo, Otsuka, Shigeto, Senoo, Keishi
Publicado 2017

Geomonas oryzae gen. nov., sp. nov., Geomonas edaphica sp. nov., Geomonas ferrireducens sp. nov., Geomonas terrae sp. nov., Four Ferric-Reducing Bacteria Isolated From Paddy Soil,...

por Xu, Zhenxing, Masuda, Yoko, Itoh, Hideomi, Ushijima, Natsumi, Shiratori, Yutaka, Senoo, Keishi
Publicado 2019

Advantages of functional single-cell isolation method over standard agar plate dilution method as a tool for studying denitrifying bacteria in rice paddy soil

por Nishizawa, Tomoyasu, Tago, Kanako, Uei, Yusuke, Ishii, Satoshi, Isobe, Kazuo, Otsuka, Shigeto, Senoo, Keishi
Publicado 2012

Seasonal Transition of Active Bacterial and Archaeal Communities in Relation to Water Management in Paddy Soils

por Itoh, Hideomi, Ishii, Satoshi, Shiratori, Yutaka, Oshima, Kenshiro, Otsuka, Shigeto, Hattori, Masahira, Senoo, Keishi
Publicado 2013

Genome Sequences of Two Azospirillum sp. Strains, TSA2S and TSH100, Plant Growth-Promoting Rhizobacteria with N(2)O Mitigation Abilities

por Gao, Nan, Shen, Weishou, Nishizawa, Tomoyasu, Isobe, Kazuo, Guo, Yong, Ying, Hanjie, Senoo, Keishi
Publicado 2019

Genome-Based Taxonomic Rearrangement of the Order Geobacterales Including the Description of Geomonas azotofigens sp. nov. and Geomonas diazotrophica sp. nov.

por Xu, Zhenxing, Masuda, Yoko, Wang, Xueding, Ushijima, Natsumi, Shiratori, Yutaka, Senoo, Keishi, Itoh, Hideomi
Publicado 2021

Biological nitrogen fixation in the long-term nitrogen-fertilized and unfertilized paddy fields, with special reference to diazotrophic iron-reducing bacteria

por Masuda, Yoko, Satoh, Sakura, Miyamoto, Ryota, Takano, Ryo, Ishii, Katsuhiro, Ohba, Hirotomo, Shiratori, Yutaka, Senoo, Keishi
Publicado 2023

Description of Three Novel Members in the Family Geobacteraceae, Oryzomonas japonicum gen. nov., sp. nov., Oryzomonas sagensis sp. nov., and Oryzomonas ruber sp. nov.

por Xu, Zhenxing, Masuda, Yoko, Hayakawa, Chie, Ushijima, Natsumi, Kawano, Keisuke, Shiratori, Yutaka, Senoo, Keishi, Itoh, Hideomi
Publicado 2020

Diversity and specificity of the bacterial community in Chinese horse milk cheese

por Zhu, Lin, Zeng, Chunlin, Yang, Sai, Hou, Zhaozhi, Wang, Yuan, Hu, Xinyu, Senoo, Keishi, Wei, Wei
Publicado 2020

Dissimilatory Nitrate Reduction to Ammonium and Responsible Microbes in Japanese Rice Paddy Soil

por Nojiri, Yosuke, Kaneko, Yuka, Azegami, Yoichi, Shiratori, Yutaka, Ohte, Nobuhito, Senoo, Keishi, Otsuka, Shigeto, Isobe, Kazuo
Publicado 2020

Presence of Cu-Type (NirK) and cd(1)-Type (NirS) Nitrite Reductase Genes in the Denitrifying Bacterium Bradyrhizobium nitroreducens sp. nov.

por Jang, Jeonghwan, Ashida, Naoaki, Kai, Ayaaki, Isobe, Kazuo, Nishizawa, Tomoyasu, Otsuka, Shigeto, Yokota, Akira, Senoo, Keishi, Ishii, Satoshi
Publicado 2018

Genome Sequence of Arthrobacter sp. UKPF54-2, a Plant Growth-Promoting Rhizobacterial Strain Isolated from Paddy Soil

por Shen, Weishou, Yu, Xinchun, Gao, Nan, Ota, Sayuri, Shiratori, Yutaka, Nishizawa, Tomoyasu, Isobe, Kazuo, He, Xinhua, Senoo, Keishi
Publicado 2019

Distinct Community Composition of Previously Uncharacterized Denitrifying Bacteria and Fungi across Different Land-Use Types

por Fujimura, Reiko, Azegami, Yoichi, Wei, Wei, Kakuta, Hiroko, Shiratori, Yutaka, Ohte, Nobuhito, Senoo, Keishi, Otsuka, Shigeto, Isobe, Kazuo
Publicado 2020