The role of genetic sequencing and analysis in the polio eradication programme

por Jorgensen, David, Pons-Salort, Margarita, Shaw, Alexander G, Grassly, Nicholas C
Publicado 2020

Development of the gut microbiota during early life in premature and term infants

por Sim, Kathleen, Powell, Elizabeth, Cornwell, Emma, Simon Kroll, J., Shaw, Alexander G.
Publicado 2023

Time Taken to Detect and Respond to Polio Outbreaks in Africa and the Potential Impact of Direct Molecular Detection and Nanopore Sequencing

por Shaw, Alexander G, Cooper, Laura V, Gumede, Nicksy, Bandyopadhyay, Ananda S, Grassly, Nicholas C, Blake, Isobel M
Publicado 2021

Antibiotic resistance potential of the healthy preterm infant gut microbiome

por Rose, Graham, Shaw, Alexander G., Sim, Kathleen, Wooldridge, David J., Li, Ming-Shi, Gharbia, Saheer, Misra, Raju, Kroll, John Simon
Publicado 2017

Dynamics of toxigenic Clostridium perfringens colonisation in a cohort of prematurely born neonatal infants

por Shaw, Alexander G., Cornwell, Emma, Sim, Kathleen, Thrower, Hannah, Scott, Hannah, Brown, Joseph C. S., Dixon, Ronald A., Kroll, J. Simon
Publicado 2020

Latitude in sample handling and storage for infant faecal microbiota studies: the elephant in the room?

por Shaw, Alexander G., Sim, Kathleen, Powell, Elizabeth, Cornwell, Emma, Cramer, Teresa, McClure, Zoë E., Li, Ming-Shi, Kroll, J. Simon
Publicado 2016

Premature neonatal gut microbial community patterns supporting an epithelial TLR-mediated pathway for necrotizing enterocolitis

por Shaw, Alexander G., Sim, Kathleen, Rose, Graham, Wooldridge, David J., Li, Ming-Shi, Misra, Raju V., Gharbia, Saheer, Kroll, J. Simon
Publicado 2021

Gastrointestinal, vaginal, nasopharyngeal, and breast milk microbiota profiles and breast milk metabolomic changes in Gambian infants over the first two months of lactation: A pros...

por Karampatsas, Konstantinos, Faal, Amadou, Jaiteh, Mustapha, Garcia-Perez, Isabel, Aller, Sean, Shaw, Alexander G., Kopytek, Aleksandra, Witney, Adam A., Le Doare, Kirsty
Publicado 2022

Noninvasive Fecal Cytokine and Microbiota Profiles Predict Commencement of Necrotizing Enterocolitis in a Proof-of-Concept Study

por Zenner, Christian, Chalklen, Lisa, Adjei, Helena, Dalby, Matthew J., Mitra, Suparna, Cornwell, Emma, Shaw, Alexander G., Sim, Kathleen, Kroll, J. Simon, Hall, Lindsay J.
Publicado 2023

Wastewater Surveillance in Europe for Non-Polio Enteroviruses and Beyond

por Bubba, Laura, Benschop, Kimberley S. M., Blomqvist, Soile, Duizer, Erwin, Martin, Javier, Shaw, Alexander G., Bailly, Jean-Luc, Rasmussen, Lasse D., Baicus, Anda, Fischer, Thea K., Harvala, Heli
Publicado 2023

Comparison of Eleven RNA Extraction Methods for Poliovirus Direct Molecular Detection in Stool Samples

por Akello, Joyce Odeke, Bujaki, Erika, Shaw, Alexander G., Khurshid, Adnan, Arshad, Yasir, Troman, Catherine, Majumdar, Manasi, O'Toole, Áine, Rambaut, Andrew, Alam, Muhammad Masroor, Martin, Javier, Grassly, Nicholas C.
Publicado 2023

Dysbiosis Anticipating Necrotizing Enterocolitis in Very Premature Infants

por Sim, Kathleen, Shaw, Alexander G., Randell, Paul, Cox, Michael J., McClure, Zoë E., Li, Ming-Shi, Haddad, Munther, Langford, Paul R., Cookson, William O. C. M., Moffatt, Miriam F., Kroll, J. Simon
Publicado 2015

Late-Onset Bloodstream Infection and Perturbed Maturation of the Gastrointestinal Microbiota in Premature Infants

por Shaw, Alexander G., Sim, Kathleen, Randell, Paul, Cox, Michael J., McClure, Zoë E., Li, Ming-Shi, Donaldson, Hugo, Langford, Paul R., Cookson, William O. C. M., Moffatt, Miriam F., Kroll, J. Simon
Publicado 2015

Rapid and Sensitive Direct Detection and Identification of Poliovirus from Stool and Environmental Surveillance Samples by Use of Nanopore Sequencing

por Shaw, Alexander G., Majumdar, Manasi, Troman, Catherine, O’Toole, Áine, Benny, Blossom, Abraham, Dilip, Praharaj, Ira, Kang, Gagandeep, Sharif, Salmaan, Alam, Muhammad Masroor, Shaukat, Shahzad, Angez, Mehar, Khurshid, Adnan, Mahmood, Nayab, Arshad, Yasir, Rehman, Lubna, Mujtaba, Ghulam, Akthar, Ribqa, Salman, Muhammad, Klapsa, Dimitra, Hajarha, Yara, Asghar, Humayun, Bandyopadhyay, Ananda, Rambaut, Andrew, Martin, Javier, Grassly, Nicholas
Publicado 2020

Particular genomic and virulence traits associated with preterm infant-derived toxigenic Clostridium perfringens strains

por Kiu, Raymond, Shaw, Alexander G., Sim, Kathleen, Acuna-Gonzalez, Antia, Price, Christopher A., Bedwell, Harley, Dreger, Sally A., Fowler, Wesley J., Cornwell, Emma, Pickard, Derek, Belteki, Gusztav, Malsom, Jennifer, Phillips, Sarah, Young, Gregory R., Schofield, Zoe, Alcon-Giner, Cristina, Berrington, Janet E., Stewart, Christopher J., Dougan, Gordon, Clarke, Paul, Douce, Gillian, Robinson, Stephen D., Kroll, J. Simon, Hall, Lindsay J.
Publicado 2023

Sensitive poliovirus detection using nested PCR and nanopore sequencing: a prospective validation study

por Shaw, Alexander G., Mampuela, Tresor Kabeya, Lofiko, Emmanuel Lokilo, Pratt, Catherine, Troman, Catherine, Bujaki, Erika, O’Toole, Áine, Akello, Joyce Odeke, Aziza, Adrienne Amuri, Lusamaki, Eddy Kinganda, Makangara, Jean Claude, Akonga, Marceline, Lay, Yvonne, Nsunda, Bibiche, White, Bailey, Jorgensen, David, Pukuta, Elizabeth, Riziki, Yogolelo, Rankin, Kathleen E., Rambaut, Andrew, Ahuka-Mundeke, Steve, Muyembe, Jean-Jacques, Martin, Javier, Grassly, Nicholas C., Mbala-Kingebeni, Placide
Publicado 2023