Physicochemical mechanisms of protein regulation by phosphorylation

por Nishi, Hafumi, Shaytan, Alexey, Panchenko, Anna R.
Publicado 2014

H2A-H2B Histone Dimer Plasticity and Its Functional Implications

por Kniazeva, Anastasiia S., Armeev, Grigoriy A., Shaytan, Alexey K.
Publicado 2022

Editorial: Recent advances in molecular properties of DNA-protein interactions, chromatin and their biological roles

por Shi, Xiangyan, Nordenskiöld, Lars, Sokolova, Olga S., Shaytan, Alexey K.
Publicado 2023

Nucleosomes and their complexes in the cryoEM era: Trends and limitations

por Armeev, Grigoriy A., Gribkova, Anna K., Shaytan, Alexey K.
Publicado 2022

Comparative Computational Study of Interaction of C(60)-Fullerene and Tris-Malonyl-C(60)-Fullerene Isomers with Lipid Bilayer: Relation to Their Antioxidant Effect

por Bozdaganyan, Marine E., Orekhov, Philipp S., Shaytan, Alexey K., Shaitan, Konstantin V.
Publicado 2014

Histone dynamics mediate DNA unwrapping and sliding in nucleosomes

por Armeev, Grigoriy A., Kniazeva, Anastasiia S., Komarova, Galina A., Kirpichnikov, Mikhail P., Shaytan, Alexey K.
Publicado 2021

Hydroxyl-radical footprinting combined with molecular modeling identifies unique features of DNA conformation and nucleosome positioning

por Shaytan, Alexey K., Xiao, Hua, Armeev, Grigoriy A., Wu, Carl, Landsman, David, Panchenko, Anna R.
Publicado 2017

Trajectories of microsecond molecular dynamics simulations of nucleosomes and nucleosome core particles

por Shaytan, Alexey K., Armeev, Grigoriy A., Goncearenco, Alexander, Zhurkin, Victor B., Landsman, David, Panchenko, Anna R.
Publicado 2016

HistoneDB 2.0: a histone database with variants—an integrated resource to explore histones and their variants

por Draizen, Eli J., Shaytan, Alexey K., Mariño-Ramírez, Leonardo, Talbert, Paul B., Landsman, David, Panchenko, Anna R.
Publicado 2016

Pausing as a mechanism of nucleosome recovery

por Chang, Han-Wen, Kulaeva, Olga I, Shaytan, Alexey, Kibanov, M, Severinov, K, Clark, David J, Studitsky, Vasily M
Publicado 2013

Self-organizing bioinspired oligothiophene–oligopeptide hybrids

por Shaytan, Alexey K, Schillinger, Eva-Kathrin, Mena-Osteritz, Elena, Schmid, Sylvia, Khalatur, Pavel G, Bäuerle, Peter, Khokhlov, Alexei R
Publicado 2011

MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones

por El Kennani, Sara, Adrait, Annie, Shaytan, Alexey K., Khochbin, Saadi, Bruley, Christophe, Panchenko, Anna R., Landsman, David, Pflieger, Delphine, Govin, Jérôme
Publicado 2017

Structure of an Intranucleosomal DNA Loop That Senses DNA Damage during Transcription

por Gerasimova, Nadezhda S., Volokh, Olesya I., Pestov, Nikolay A., Armeev, Grigory A., Kirpichnikov, Mikhail P., Shaytan, Alexey K., Sokolova, Olga S., Studitsky, Vasily M.
Publicado 2022

Analysis of the mechanism of nucleosome survival during transcription

por Chang, Han-Wen, Kulaeva, Olga I., Shaytan, Alexey K., Kibanov, Mikhail, Kuznedelov, Konstantin, Severinov, Konstantin V., Kirpichnikov, Mikhail P., Clark, David J., Studitsky, Vasily M.
Publicado 2014

Structure and Dynamics of Compact Dinucleosomes: Analysis by Electron Microscopy and spFRET

por Stefanova, Maria E., Volokh, Olesya I., Chertkov, Oleg V., Armeev, Grigory A., Shaytan, Alexey K., Feofanov, Alexey V., Kirpichnikov, Mikhail P., Sokolova, Olga S., Studitsky, Vasily M.
Publicado 2023

N-Terminal Tails of Histones H2A and H2B Differentially Affect Transcription by RNA Polymerase II In Vitro

por Chang, Han-Wen, Feofanov, Alexey V., Lyubitelev, Alexander V., Armeev, Grigory A., Kotova, Elena Y., Hsieh, Fu-Kai, Kirpichnikov, Mikhail P., Shaytan, Alexey K., Studitsky, Vasily M.
Publicado 2022

Molecular basis of CENP-C association with the CENP-A nucleosome at yeast centromeres

por Xiao, Hua, Wang, Feng, Wisniewski, Jan, Shaytan, Alexey K., Ghirlando, Rodolfo, FitzGerald, Peter C., Huang, Yingzi, Wei, Debbie, Li, Shipeng, Landsman, David, Panchenko, Anna R., Wu, Carl
Publicado 2017

A standardized nomenclature for mammalian histone genes

por Seal, Ruth L., Denny, Paul, Bruford, Elspeth A., Gribkova, Anna K., Landsman, David, Marzluff, William F., McAndrews, Monica, Panchenko, Anna R., Shaytan, Alexey K., Talbert, Paul B.
Publicado 2022

Electron microscopy analysis of ATP-independent nucleosome unfolding by FACT

por Sivkina, Anastasiia L., Karlova, Maria G., Valieva, Maria E., McCullough, Laura L., Formosa, Timothy, Shaytan, Alexey K., Feofanov, Alexey V., Kirpichnikov, Mikhail P., Sokolova, Olga S., Studitsky, Vasily M.
Publicado 2022

Interactions of Nucleosomes with Acidic Patch-Binding Peptides: A Combined Structural Bioinformatics, Molecular Modeling, Fluorescence Polarization, and Single-Molecule FRET Study

por Oleinikov, Pavel D., Fedulova, Anastasiia S., Armeev, Grigoriy A., Motorin, Nikita A., Singh-Palchevskaia, Lovepreet, Sivkina, Anastasiia L., Feskin, Pavel G., Glukhov, Grigory S., Afonin, Dmitry A., Komarova, Galina A., Kirpichnikov, Mikhail P., Studitsky, Vasily M., Feofanov, Alexey V., Shaytan, Alexey K.
Publicado 2023