From case studies to community knowledge base: MSeqDR provides a platform for the curation and genomic analysis of mitochondrial diseases

por Falk, Marni J., Shen, Lishuang, Gai, Xiaowu
Publicado 2016

Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by Country

por Shen, Lishuang, Dien Bard, Jennifer, Biegel, Jaclyn A., Judkins, Alexander R., Gai, Xiaowu
Publicado 2020

Emerging variants of concern in SARS-CoV-2 membrane protein: a highly conserved target with potential pathological and therapeutic implications

por Shen, Lishuang, Bard, Jennifer Dien, Triche, Timothy J., Judkins, Alexander R., Biegel, Jaclyn A., Gai, Xiaowu
Publicado 2021

Rapidly emerging SARS-CoV-2 B.1.1.7 sub-lineage in the United States of America with spike protein D178H and membrane protein V70L mutations

por Shen, Lishuang, Bard, Jennifer Dien, Triche, Timothy J., Judkins, Alexander R., Biegel, Jaclyn A., Gai, Xiaowu
Publicado 2021

BarleyBase—an expression profiling database for plant genomics

por Shen, Lishuang, Gong, Jian, Caldo, Rico A., Nettleton, Dan, Cook, Dianne, Wise, Roger P., Dickerson, Julie A.
Publicado 2005

HmtDB 2016: data update, a better performing query system and human mitochondrial DNA haplogroup predictor

por Clima, Rosanna, Preste, Roberto, Calabrese, Claudia, Diroma, Maria Angela, Santorsola, Mariangela, Scioscia, Gaetano, Simone, Domenico, Shen, Lishuang, Gasparre, Giuseppe, Attimonelli, Marcella
Publicado 2017

Whole Genome Sequencing Investigation of a Tuberculosis Outbreak in Port-au-Prince, Haiti Caused by a Strain with a “Low-Level” rpoB Mutation L511P – Insights into a Mechanism of R...

por Ocheretina, Oksana, Shen, Lishuang, Escuyer, Vincent E., Mabou, Marie-Marcelle, Royal-Mardi, Gertrude, Collins, Sean E., Pape, Jean W., Fitzgerald, Daniel W.
Publicado 2015

A semiautomated whole-exome sequencing workflow leads to increased diagnostic yield and identification of novel candidate variants

por Ji, Jianling, Shen, Lishuang, Bootwalla, Moiz, Quindipan, Catherine, Tatarinova, Tatiana, Maglinte, Dennis T., Buckley, Jonathan, Raca, Gordana, Saitta, Sulagna C., Biegel, Jaclyn A., Gai, Xiaowu
Publicado 2019

NOD2 genetic variants and sarcoidosis-associated uveitis()

por Davoudi, Samaneh, Navarro-Gomez, Daniel, Shen, Lishuang, Ung, Cindy, Ren, Aiai, Sullivan, Lynn, Kwong, Mindy, Janessian, Maria, Comander, Jason, Gai, Xiaowu, Lobo, Ann-Marie, Papaliodis, George N., Sobrin, Lucia
Publicado 2016

High Prevalence of SARS-CoV-2 Genetic Variation and D614G Mutation in Pediatric Patients With COVID-19

por Pandey, Utsav, Yee, Rebecca, Shen, Lishuang, Judkins, Alexander R, Bootwalla, Moiz, Ryutov, Alex, Maglinte, Dennis T, Ostrow, Dejerianne, Precit, Mimi, Biegel, Jaclyn A, Bender, Jeffrey M, Gai, Xiaowu, Dien Bard, Jennifer
Publicado 2020

Early pandemic molecular diversity of SARS-CoV-2 in children

por Moustafa, Ahmed M., Otto, William, Gai, Xiaowu, Pandey, Utsav, Ryutov, Alex, Bootwalla, Moiz, Maglinte, Dennis T, Shen, Lishuang, Ruble, David, Ostrow, Dejerianne, Gerber, Jeffrey S., Bard, Jennifer Dien, Harris, Rebecca M., Planet, Paul J.
Publicado 2021

Inter-eye genomic heterogeneity in bilateral retinoblastoma via aqueous humor liquid biopsy

por Wong, Elyssa Y., Xu, Liya, Shen, Lishuang, Kim, Mary E., Polski, Ashley, Prabakar, Rishvanth K., Shah, Rachana, Jubran, Rima, Kim, Jonathan W., Biegel, Jaclyn A., Gai, Xiaowu, Kuhn, Peter, Hicks, James, Berry, Jesse L.
Publicado 2021

Establishing the Clinical Utility of ctDNA Analysis for Diagnosis, Prognosis, and Treatment Monitoring of Retinoblastoma: The Aqueous Humor Liquid Biopsy

por Xu, Liya, Kim, Mary E., Polski, Ashley, Prabakar, Rishvanth K., Shen, Lishuang, Peng, Chen-Ching, Reid, Mark W., Chévez-Barrios, Patricia, Kim, Jonathan W., Shah, Rachana, Jubran, Rima, Kuhn, Peter, Cobrinik, David, Biegel, Jaclyn A., Gai, Xiaowu, Hicks, James, Berry, Jesse L.
Publicado 2021

Mitochondrial single-stranded DNA binding protein novel de novo SSBP1 mutation in a child with single large-scale mtDNA deletion (SLSMD) clinically manifesting as Pearson, Kearns-S...

por Gustafson, Margaret A., McCormick, Elizabeth M., Perera, Lalith, Longley, Matthew J., Bai, Renkui, Kong, Jianping, Dulik, Matthew, Shen, Lishuang, Goldstein, Amy C., McCormack, Shana E., Laskin, Benjamin L., Leroy, Bart P., Ortiz-Gonzalez, Xilma R., Ellington, Meredith G., Copeland, William C., Falk, Marni J.
Publicado 2019

High resolution mapping and positional cloning of ENU-induced mutations in the Rw region of mouse chromosome 5

por Ching, Yung-Hao, Munroe, Robert J, Moran, Jennifer L, Barker, Anna K, Mauceli, Evan, Fennell, Tim, diPalma, Frederica, Lindblad-Toh, Kerstin, Abcunas, Lindsay M, Gilmour, Joyanna F, Harris, Tanya P, Kloet, Susan L, Luo, Yunhai, McElwee, John L, Mu, Weipeng, Park, Hyo K, Rogal, David L, Schimenti, Kerry J, Shen, Lishuang, Shindo, Mami, Shou, James Y, Stenson, Erin K, Stover, Patrick J, Schimenti, John C
Publicado 2010

Persistent SARS-CoV-2 infection and increasing viral variants in children and young adults with impaired humoral immunity

por Truong, Thao T., Ryutov, Alex, Pandey, Utsav, Yee, Rebecca, Goldberg, Lior, Bhojwani, Deepa, Aguayo-Hiraldo, Paibel, Pinsky, Benjamin A., Pekosz, Andrew, Shen, Lishuang, Boyd, Scott D., Wirz, Oliver F., Röltgen, Katharina, Bootwalla, Moiz, Maglinte, Dennis T., Ostrow, Dejerianne, Ruble, David, Han, Jennifer H., Biegel, Jaclyn A., Li, Maggie, Huang, ChunHong, Sahoo, Mayala K., Pannaraj, Pia S., O’Gorman, Maurice, Judkins, Alexander R., Gai, Xiaowu, Bard, Jennifer Dien
Publicado 2021

Increased viral variants in children and young adults with impaired humoral immunity and persistent SARS-CoV-2 infection: A consecutive case series

por Truong, Thao T., Ryutov, Alex, Pandey, Utsav, Yee, Rebecca, Goldberg, Lior, Bhojwani, Deepa, Aguayo-Hiraldo, Paibel, Pinsky, Benjamin A., Pekosz, Andrew, Shen, Lishuang, Boyd, Scott D., Wirz, Oliver F., Röltgen, Katharina, Bootwalla, Moiz, Maglinte, Dennis T., Ostrow, Dejerianne, Ruble, David, Han, Jennifer H., Biegel, Jaclyn A., Li, Maggie, Huang, ChunHong, Sahoo, Malaya K., Pannaraj, Pia S., O'Gorman, Maurice, Judkins, Alexander R., Gai, Xiaowu, Dien Bard, Jennifer
Publicado 2021

Resilience to autosomal dominant Alzheimer’s disease in a Reelin-COLBOS heterozygous man

por Lopera, Francisco, Marino, Claudia, Chandrahas, Anita S., O’Hare, Michael, Villalba-Moreno, Nelson David, Aguillon, David, Baena, Ana, Sanchez, Justin S., Vila-Castelar, Clara, Ramirez Gomez, Liliana, Chmielewska, Natalia, Oliveira, Gabriel M., Littau, Jessica Lisa, Hartmann, Kristin, Park, Kyungeun, Krasemann, Susanne, Glatzel, Markus, Schoemaker, Dorothee, Gonzalez-Buendia, Lucia, Delgado-Tirado, Santiago, Arevalo-Alquichire, Said, Saez-Torres, Kahira L., Amarnani, Dhanesh, Kim, Leo A., Mazzarino, Randall C., Gordon, Harper, Bocanegra, Yamile, Villegas, Andres, Gai, Xiaowu, Bootwalla, Moiz, Ji, Jianling, Shen, Lishuang, Kosik, Kenneth S., Su, Yi, Chen, Yinghua, Schultz, Aaron, Sperling, Reisa A., Johnson, Keith, Reiman, Eric M., Sepulveda-Falla, Diego, Arboleda-Velasquez, Joseph F., Quiroz, Yakeel T.
Publicado 2023

Resistance to autosomal dominant Alzheimer’s in an APOE3-Christchurch homozygote: a case report

por Arboleda-Velasquez, Joseph F., Lopera, Francisco, O’Hare, Michael, Delgado-Tirado, Santiago, Marino, Claudia, Chmielewska, Natalia, Saez-Torres, Kahira L., Amarnani, Dhanesh, Schultz, Aaron P., Sperling, Reisa A., Leyton-Cifuentes, David, Chen, Kewei, Baena, Ana, Aguillon, David, Rios-Romenets, Silvia, Giraldo, Margarita, Guzmán-Vélez, Edmarie, Norton, Daniel J., Pardilla-Delgado, Enmanuelle, Artola, Arabiye, Sanchez, Justin S., Acosta-Uribe, Juliana, Lalli, Matthew, Kosik, Kenneth S., Huentelman, Matthew J., Zetterberg, Henrik, Blennow, Kaj, Reiman, Rebecca A., Luo, Ji, Chen, Yinghua, Thiyyagura, Pradeep, Su, Yi, Jun, Gyungah R., Naymik, Marcus, Gai, Xiaowu, Bootwalla, Moiz, Ji, Jianling, Shen, Lishuang, Miller, John B., Kim, Leo A., Tariot, Pierre N., Johnson, Keith A., Reiman, Eric M., Quiroz, Yakeel T.
Publicado 2019