Navigating the AI frontier: ethical considerations and best practices in microbial genomics research

por Page, Andrew J., Tumelty, Niamh M., Sheppard, Samuel K.
Publicado 2023

Next-generation microbiology: from comparative genomics to gene function

por Kobras, Carolin M., Fenton, Andrew K., Sheppard, Samuel K.
Publicado 2021

A Gene-By-Gene Approach to Bacterial Population Genomics: Whole Genome MLST of Campylobacter

por Sheppard, Samuel K., Jolley, Keith A., Maiden, Martin C. J.
Publicado 2012

Trends in fluoroquinolone resistance in Campylobacter

por Sproston, Emma L., Wimalarathna, Helen M. L., Sheppard, Samuel K.
Publicado 2018

Phage Predation Shapes the Population Structure of Shiga-Toxigenic Escherichia coli O157:H7 in the UK: An Evolutionary Perspective

por Cowley, Lauren A., Dallman, Timothy J., Jenkins, Claire, Sheppard, Samuel K.
Publicado 2019

Addressing parachute research and removing barriers for LMIC researchers in Microbial Genomics

por Heinz, Eva, Holt, Kathryn E., Meehan, Conor J., Sheppard, Samuel K.
Publicado 2021

Signatures of selection in core and accessory genomes indicate different ecological drivers of diversification among Bacillus cereus clades

por White, Hugh, Vos, Michiel, Sheppard, Samuel K., Pascoe, Ben, Raymond, Ben
Publicado 2022

Efficient Inference of Recombination Hot Regions in Bacterial Genomes

por Yahara, Koji, Didelot, Xavier, Ansari, M. Azim, Sheppard, Samuel K., Falush, Daniel
Publicado 2014

Variation in Siderophore Biosynthetic Gene Distribution and Production across Environmental and Faecal Populations of Escherichia coli

por Searle, Laura J., Méric, Guillaume, Porcelli, Ida, Sheppard, Samuel K., Lucchini, Sacha
Publicado 2015

Piggy: a rapid, large-scale pan-genome analysis tool for intergenic regions in bacteria

por Thorpe, Harry A, Bayliss, Sion C, Sheppard, Samuel K, Feil, Edward J
Publicado 2018

Patterns of cross‐resistance and collateral sensitivity between clinical antibiotics and natural antimicrobials

por Colclough, Abigail, Corander, Jukka, Sheppard, Samuel K., Bayliss, Sion C., Vos, Michiel
Publicado 2019

Campylobacter epidemiology: a descriptive study reviewing 1 million cases in England and Wales between 1989 and 2011

por Nichols, Gordon L, Richardson, Judith F, Sheppard, Samuel K, Lane, Chris, Sarran, Christophe
Publicado 2012

A phylogeny-based sampling strategy and power calculator informs genome-wide associations study design for microbial pathogens

por Farhat, Maha R, Shapiro, B Jesse, Sheppard, Samuel K, Colijn, Caroline, Murray, Megan
Publicado 2014

Draft Genome Sequence of an Enterobacter Species Associated with Illnesses and Powdered Infant Formula

por Jackson, Emily E., Ogrodzki, Pauline, Pascoe, Ben, Sheppard, Samuel K., Forsythe, Stephen J.
Publicado 2016

Machine learning to predict the source of campylobacteriosis using whole genome data

por Arning, Nicolas, Sheppard, Samuel K., Bayliss, Sion, Clifton, David A., Wilson, Daniel J.
Publicado 2021

Environmental Factors Determining the Epidemiology and Population Genetic Structure of the Bacillus cereus Group in the Field

por Raymond, Ben, Wyres, Kelly L., Sheppard, Samuel K., Ellis, Richard J., Bonsall, Michael B.
Publicado 2010

Introgression in the genus Campylobacter: generation and spread of mosaic alleles

por Sheppard, Samuel K., McCarthy, Noel D., Jolley, Keith A., Maiden, Martin C. J.
Publicado 2011

PhasomeIt: an ‘omics’ approach to cataloguing the potential breadth of phase variation in the genus Campylobacter

por Aidley, Jack, Wanford, Joseph J., Green, Luke R., Sheppard, Samuel K., Bayliss, Christopher D.
Publicado 2018

Genetic Diversity of Composite Enterotoxigenic Staphylococcus epidermidis Pathogenicity Islands

por Banaszkiewicz, Sylwia, Calland, Jessica K, Mourkas, Evangelos, Sheppard, Samuel K, Pascoe, Ben, Bania, Jacek
Publicado 2019

Evidence of potential Campylobacter jejuni zooanthroponosis in captive macaque populations

por Zang, Xiaoqi, Pascoe, Ben, Mourkas, Evangelos, Kong, Ke, Jiao, Xinan, Sheppard, Samuel K., Huang, Jinlin
Publicado 2023