Gene activity in primary T cells infected with HIV(89.6): intron retention and induction of genomic repeats

por Sherrill-Mix, Scott, Ocwieja, Karen E., Bushman, Frederic D.
Publicado 2015

Virus Structures Constrain Transmission Modes

por Bushman, Frederic D., McCormick, Kevin, Sherrill-Mix, Scott
Publicado 2019

Virome in immunodeficiency: what we know currently

por Wang, Hu, Xu, Siqi, Li, Shuang, Su, Bin, Sherrill-Mix, Scott, Liang, Guanxiang
Publicado 2023

A Reverse Transcription Loop-Mediated Isothermal Amplification Assay Optimized to Detect Multiple HIV Subtypes

por Ocwieja, Karen E., Sherrill-Mix, Scott, Liu, Changchun, Song, Jinzhao, Bau, Haim, Bushman, Frederic D.
Publicado 2015

Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9

por Bryson, Alexandra L., Hwang, Young, Sherrill-Mix, Scott, Wu, Gary D., Lewis, James D., Black, Lindsay, Clark, Tyson A., Bushman, Frederic D.
Publicado 2015

Comparison of placenta samples with contamination controls does not provide evidence for a distinct placenta microbiota

por Lauder, Abigail P., Roche, Aoife M., Sherrill-Mix, Scott, Bailey, Aubrey, Laughlin, Alice L., Bittinger, Kyle, Leite, Rita, Elovitz, Michal A., Parry, Samuel, Bushman, Frederic D.
Publicado 2016

Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing

por Ocwieja, Karen E., Sherrill-Mix, Scott, Mukherjee, Rithun, Custers-Allen, Rebecca, David, Patricia, Brown, Michael, Wang, Susana, Link, Darren R., Olson, Jeff, Travers, Kevin, Schadt, Eric, Bushman, Frederic D.
Publicado 2012

CpG Frequency in the 5′ Third of the env Gene Determines Sensitivity of Primary HIV-1 Strains to the Zinc-Finger Antiviral Protein

por Kmiec, Dorota, Nchioua, Rayhane, Sherrill-Mix, Scott, Stürzel, Christina M., Heusinger, Elena, Braun, Elisabeth, Gondim, Marcos V. P., Hotter, Dominik, Sparrer, Konstantin M. J., Hahn, Beatrice H., Sauter, Daniel, Kirchhoff, Frank
Publicado 2020

Tracking gut microbiome and bloodstream infection in critically ill adults

por Gu, Christopher H., Khatib, Layla A., Fitzgerald, Ayannah S., Graham-Wooten, Jevon, Ittner, Caroline A., Sherrill-Mix, Scott, Chuang, YuChung, Glaser, Laurel J., Meyer, Nuala J., Bushman, Frederic D., Collman, Ronald G.
Publicado 2023

Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase

por Gupta, Kushol, Turkki, Vesa, Sherrill-Mix, Scott, Hwang, Young, Eilers, Grant, Taylor, Louis, McDanal, Charlene, Wang, Ping, Temelkoff, David, Nolte, Robert T., Velthuisen, Emile, Jeffrey, Jerry, Van Duyne, Gregory D., Bushman, Frederic D.
Publicado 2016

Optimizing methods and dodging pitfalls in microbiome research

por Kim, Dorothy, Hofstaedter, Casey E., Zhao, Chunyu, Mattei, Lisa, Tanes, Ceylan, Clarke, Erik, Lauder, Abigail, Sherrill-Mix, Scott, Chehoud, Christel, Kelsen, Judith, Conrad, Máire, Collman, Ronald G., Baldassano, Robert, Bushman, Frederic D., Bittinger, Kyle
Publicado 2017

Comparison of SARS-CoV-2 variants in primary human nasal cultures indicates Delta as most cytopathic and Omicron as fastest replicating

por Tanneti, Nikhila S, Patel, Anant K, Tan, Li Hui, Marques, Andrew D, Perera, Ranawaka A.P.M., Sherrill-Mix, Scott, Kelly, Brendan J, Collman, Ronald G, Rodino, Kyle, Lee, Carole, Bushman, Frederic D, Cohen, Noam A, Weiss, Susan R
Publicado 2023

A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples

por Dollive, Serena, Peterfreund, Gregory L, Sherrill-Mix, Scott, Bittinger, Kyle, Sinha, Rohini, Hoffmann, Christian, Nabel, Christopher S, Hill, David A, Artis, David, Bachman, Michael A, Custers-Allen, Rebecca, Grunberg, Stephanie, Wu, Gary D, Lewis, James D, Bushman, Frederic D
Publicado 2012

Lack of detection of a human placenta microbiome in samples from preterm and term deliveries

por Leiby, Jacob S., McCormick, Kevin, Sherrill-Mix, Scott, Clarke, Erik L., Kessler, Lyanna R., Taylor, Louis J., Hofstaedter, Casey E., Roche, Aoife M., Mattei, Lisa M., Bittinger, Kyle, Elovitz, Michal A., Leite, Rita, Parry, Samuel, Bushman, Frederic D.
Publicado 2018

HIV latency and integration site placement in five cell-based models

por Sherrill-Mix, Scott, Lewinski, Mary K, Famiglietti, Marylinda, Bosque, Alberto, Malani, Nirav, Ocwieja, Karen E, Berry, Charles C, Looney, David, Shan, Liang, Agosto, Luis M, Pace, Matthew J, Siliciano, Robert F, O’Doherty, Una, Guatelli, John, Planelles, Vicente, Bushman, Frederic D
Publicado 2013

Detection of SARS-CoV-2 RNA using RT-LAMP and molecular beacons

por Sherrill-Mix, Scott, Hwang, Young, Roche, Aoife M., Glascock, Abigail, Weiss, Susan R., Li, Yize, Haddad, Leila, Deraska, Peter, Monahan, Caitlin, Kromer, Andrew, Graham-Wooten, Jevon, Taylor, Louis J., Abella, Benjamin S., Ganguly, Arupa, Collman, Ronald G., Van Duyne, Gregory D., Bushman, Frederic D.
Publicado 2021

Multiple Introductions of SARS-CoV-2 Alpha and Delta Variants into White-Tailed Deer in Pennsylvania

por Marques, Andrew D., Sherrill-Mix, Scott, Everett, John K., Adhikari, Hriju, Reddy, Shantan, Ellis, Julie C., Zeliff, Haley, Greening, Sabrina S., Cannuscio, Carolyn C., Strelau, Katherine M., Collman, Ronald G., Kelly, Brendan J., Rodino, Kyle G., Bushman, Frederic D., Gagne, Roderick B., Anis, Eman
Publicado 2022

SARS-CoV-2 Genomic Variation in Space and Time in Hospitalized Patients in Philadelphia

por Everett, John, Hokama, Pascha, Roche, Aoife M., Reddy, Shantan, Hwang, Young, Kessler, Lyanna, Glascock, Abigail, Li, Yize, Whelan, Jillian N., Weiss, Susan R., Sherrill-Mix, Scott, McCormick, Kevin, Whiteside, Samantha A., Graham-Wooten, Jevon, Khatib, Layla A., Fitzgerald, Ayannah S., Collman, Ronald G., Bushman, Frederic
Publicado 2021

Step-wise assembly of the neonatal virome modulated by breastfeeding

por Liang, Guanxiang, Zhao, Chunyu, Zhang, Huanjia, Mattei, Lisa, Sherrill-Mix, Scott, Bittinger, Kyle, Kessler, Lyanna R., Wu, Gary D., Baldassano, Robert N., DeRusso, Patricia, Ford, Eileen, Elovitz, Michal A., Kelly, Matthew S., Patel, Mohamed Z., Mazhani, Tiny, Gerber, Jeffrey S., Kelly, Andrea, Zemel, Babette S., Bushman, Frederic D.
Publicado 2020

SARS-CoV-2 mRNA vaccination exposes progressive adaptive immune dysfunction in patients with chronic lymphocytic leukemia

por Qin, Kai, Honjo, Kazuhito, Sherrill-Mix, Scott, Liu, Weimin, Stoltz, Regina, Oman, Allisa K., Hall, Lucinda A., Li, Ran, Sterrett, Sarah, Frederick, Ellen R., Lancaster, Jeffrey R., Narkhede, Mayur, Mehta, Amitkumar, Ogunsile, Foluso J., Patel, Rima B., Ketas, Thomas J., Cruz Portillo, Victor M, Cupo, Albert, Larimer, Benjamin M., Bansal, Anju, Goepfert, Paul A., Hahn, Beatrice H., Davis, Randall S.
Publicado 2022