Ligation‐based assay for variant typing without sequencing: Application to SARS‐CoV‐2 variants of concern

por Nelson, Dalton J., Shilts, Meghan H., Pakala, Suman B., Das, Suman R., Schmitz, Jonathan E., Haselton, Frederick R.
Publicado 2022

The Salivary Microbiome Is Altered in Children With Eosinophilic Esophagitis and Correlates With Disease Activity

por Hiremath, Girish, Shilts, Meghan H., Boone, Helen H., Correa, Hernan, Acra, Sari, Tovchigrechko, Andrey, Rajagopala, Seesandra V., Das, Suman R.
Publicado 2019

Evolutionary dynamics of respiratory syncytial virus in Buenos Aires: Viral diversity, migration, and subgroup replacement

por Goya, Stephanie, Lucion, Maria Florencia, Shilts, Meghan H, Juárez, María del Valle, Gentile, Angela, Mistchenko, Alicia S, Viegas, Mariana, Das, Suman R
Publicado 2023

Nearly Complete Genome Sequences of 17 Enterovirus D68 Strains from Kansas City, Missouri, 2018

por Pakala, Suman B., Tan, Yi, Hassan, Ferdaus, Mai, Annie, Markowitz, Robert H., Shilts, Meghan H., Rajagopala, Seesandra V., Selvarangan, Rangaraj, Das, Suman R.
Publicado 2019

Species-specific transcriptomic changes upon respiratory syncytial virus infection in cotton rats

por Strickland, Britton A., Rajagopala, Seesandra V., Kamali, Arash, Shilts, Meghan H., Pakala, Suman B., Boukhvalova, Marina S., Yooseph, Shibu, Blanco, Jorge C. G., Das, Suman R.
Publicado 2022

Molecular characterization of respiratory syncytial viruses circulating in a paediatric cohort in Amman, Jordan

por Trovão, Nídia S., Khuri-Bulos, Najwa, Tan, Yi, Puri, Vinita, Shilts, Meghan H., Halpin, Rebecca A., Fedorova, Nadia B., Nelson, Martha I., Halasa, Natasha, Das, Suman R.
Publicado 2019

Cotton rat lung transcriptome reveals host immune response to Respiratory Syncytial Virus infection

por Rajagopala, Seesandra V., Singh, Harinder, Patel, Mira C., Wang, Wei, Tan, Yi, Shilts, Meghan H., Hartert, Tina V., Boukhvalova, Marina S., Blanco, Jorge C. G., Das, Suman R.
Publicado 2018

Influence of Sex on Respiratory Syncytial Virus Genotype Infection Frequency and Nasopharyngeal Microbiome

por Tan, Yi, Shilts, Meghan H., Rosas-Salazar, Christian, Puri, Vinita, Fedorova, Nadia, Halpin, Rebecca A., Ma, Siyuan, Anderson, Larry J., Peebles, R. Stokes, Hartert, Tina V., Das, Suman R.
Publicado 2023

Metatranscriptomics to characterize respiratory virome, microbiome, and host response directly from clinical samples

por Rajagopala, Seesandra V., Bakhoum, Nicole G., Pakala, Suman B., Shilts, Meghan H., Rosas-Salazar, Christian, Mai, Annie, Boone, Helen H., McHenry, Rendie, Yooseph, Shibu, Halasa, Natasha, Das, Suman R.
Publicado 2021

Nasopharyngeal Haemophilus and local immune response during infant respiratory syncytial virus infection

por Shilts, Meghan H., Rosas-Salazar, Christian, Turi, Kedir N., Rajan, Devi, Rajagopala, Seesandra V., Patterson, Megan F., Gebretsadik, Tebeb, Anderson, Larry J., Peebles, R. Stokes, Hartert, Tina V., Das, Suman R.
Publicado 2021

SARS-CoV-2 infection and viral load are associated with the upper respiratory tract microbiome

por Rosas-Salazar, Christian, Kimura, Kyle S., Shilts, Meghan H., Strickland, Britton A., Freeman, Michael H., Wessinger, Bronson C., Gupta, Veerain, Brown, Hunter M., Rajagopala, Seesandra V., Turner, Justin H., Das, Suman R.
Publicado 2021

Lack of selective resistance of influenza A virus in presence of host-targeted antiviral, UV-4B

por Warfield, Kelly L., Schaaf, Kaitlyn R., DeWald, Lisa Evans, Spurgers, Kevin B., Wang, Wei, Stavale, Eric, Mendenhall, Michelle, Shilts, Meghan H., Stockwell, Timothy B., Barnard, Dale L., Ramstedt, Urban, Das, Suman R.
Publicado 2019

Upper respiratory tract microbiota dynamics following COVID-19 in adults

por Rosas-Salazar, Christian, Kimura, Kyle S., Shilts, Meghan H., Strickland, Britton A., Freeman, Michael H., Wessinger, Bronson C., Gupta, Veerain, Brown, Hunter M., Boone, Helen H., Rajagopala, Seesandra V., Turner, Justin H., Das, Suman Ranjan
Publicado 2023

Viral Genetic Determinants of Prolonged Respiratory Syncytial Virus Infection Among Infants in a Healthy Term Birth Cohort

por Lawless, Dylan, McKennan, Christopher G, Das, Suman R, Junier, Thomas, Xu, Zhi Ming, Anderson, Larry J, Gebretsadik, Tebeb, Shilts, Meghan H, Larkin, Emma, Rosas-Salazar, Christian, Chappell, James D, Fellay, Jacques, Hartert, Tina V
Publicado 2022

Microbial community structure and composition is associated with host species and sex in Sigmodon cotton rats

por Strickland, Britton A., Patel, Mira C., Shilts, Meghan H., Boone, Helen H., Kamali, Arash, Zhang, Wei, Stylos, Daniel, Boukhvalova, Marina S., Rosas-Salazar, Christian, Yooseph, Shibu, Rajagopala, Seesandra V., Blanco, Jorge C. G., Das, Suman R.
Publicado 2021

COVID‐19 severity from Omicron and Delta SARS‐CoV‐2 variants

por Wrenn, Jesse O., Pakala, Suman B., Vestal, Grant, Shilts, Meghan H., Brown, Hunter M., Bowen, Sara M., Strickland, Britton A., Williams, Timothy, Mallal, Simon A., Jones, Ian D., Schmitz, Jonathan E., Self, Wesley H., Das, Suman R.
Publicado 2022

Distinct mucosal microbial communities in infants with surgical necrotizing enterocolitis correlate with age and antibiotic exposure

por Romano-Keeler, Joann, Shilts, Meghan H., Tovchigrechko, Andrey, Wang, Chunlin, Brucker, Robert M., Moore, Daniel J., Fonnesbeck, Christopher, Meng, Shufang, Correa, Hernan, Lovvorn, Harold N., Tang, Yi-Wei, Hooper, Lora, Bordenstein, Seth R., Das, Suman R., Weitkamp, Jörn-Hendrik
Publicado 2018

Mucosal gene expression in response to SARS-CoV-2 is associated with early viral load

por Rajagopala, Seesandra V., Strickland, Britton A., Pakala, Suman B., Kimura, Kyle S., Shilts, Meghan H., Rosas-Salazar, Christian, Brown, Hunter M., Freeman, Michael H., Wessinger, Bronson C., Gupta, Veerain, Phillips, Elizabeth, Mallal, Simon A., Turner, Justin H., Das, Suman R.
Publicado 2022

Mucosal Gene Expression in Response to SARS-CoV-2 Is Associated with Viral Load

por Rajagopala, Seesandra V., Strickland, Britton A., Pakala, Suman B., Kimura, Kyle S., Shilts, Meghan H., Rosas-Salazar, Christian, Brown, Hunter M., Freeman, Michael H., Wessinger, Bronson C., Gupta, Veerain, Phillips, Elizabeth, Mallal, Simon A., Turner, Justin H., Das, Suman R.
Publicado 2023

Dietary Arginine Regulates Severity of Experimental Colitis and Affects the Colonic Microbiome

por Singh, Kshipra, Gobert, Alain P., Coburn, Lori A., Barry, Daniel P., Allaman, Margaret, Asim, Mohammad, Luis, Paula B., Schneider, Claus, Milne, Ginger L., Boone, Helen H., Shilts, Meghan H., Washington, M. Kay, Das, Suman R., Piazuelo, M. Blanca, Wilson, Keith T.
Publicado 2019