Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4–5 in Splicing

por Xiao, Yuanyuan, Yang, Yee H, Burckin, Todd A, Shiue, Lily, Hartzog, Grant A, Segal, Mark R
Publicado 2005

Rbfox1 Downregulation and Altered Calpain 3 Splicing by FRG1 in a Mouse Model of Facioscapulohumeral Muscular Dystrophy (FSHD)

por Pistoni, Mariaelena, Shiue, Lily, Cline, Melissa S., Bortolanza, Sergia, Neguembor, Maria Victoria, Xynos, Alexandros, Ares, Manuel, Gabellini, Davide
Publicado 2013

Autogenous cross-regulation of Quaking mRNA processing and translation balances Quaking functions in splicing and translation

por Fagg, W. Samuel, Liu, Naiyou, Fair, Jeffrey Haskell, Shiue, Lily, Katzman, Sol, Donohue, John Paul, Ares, Manuel
Publicado 2017

The splicing regulator Rbfox1 (A2BP1) controls neuronal excitation in the mammalian brain

por Gehman, Lauren T., Stoilov, Peter, Maguire, Jamie, Damianov, Andrey, Lin, Chia-Ho, Shiue, Lily, Ares, Manuel, Mody, Istvan, Black, Douglas L.
Publicado 2011

Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome

por Talkish, Jason, Igel, Haller, Perriman, Rhonda J., Shiue, Lily, Katzman, Sol, Munding, Elizabeth M., Shelansky, Robert, Donohue, John Paul, Ares, Manuel
Publicado 2019

Correction: Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome

por Talkish, Jason, Igel, Haller, Perriman, Rhonda J., Shiue, Lily, Katzman, Sol, Munding, Elizabeth M., Shelansky, Robert, Donohue, John Paul, Ares Jr., Manuel
Publicado 2020

Long pre-mRNA depletion and RNA missplicing contribute to neuronal vulnerability from loss of TDP-43

por Polymenidou, Magdalini, Lagier-Tourenne, Clotilde, Hutt, Kasey R., Huelga, Stephanie C., Moran, Jacqueline, Liang, Tiffany Y., Ling, Shuo-Chien, Sun, Eveline, Wancewicz, Edward, Mazur, Curt, Kordasiewicz, Holly, Sedaghat, Yalda, Donohue, John Paul, Shiue, Lily, Bennett, C. Frank, Yeo, Gene W., Cleveland, Don W.
Publicado 2011

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses

por Kapeli, Katannya, Pratt, Gabriel A., Vu, Anthony Q., Hutt, Kasey R., Martinez, Fernando J., Sundararaman, Balaji, Batra, Ranjan, Freese, Peter, Lambert, Nicole J., Huelga, Stephanie C., Chun, Seung J., Liang, Tiffany Y., Chang, Jeremy, Donohue, John P., Shiue, Lily, Zhang, Jiayu, Zhu, Haining, Cambi, Franca, Kasarskis, Edward, Hoon, Shawn, Ares Jr., Manuel, Burge, Christopher B., Ravits, John, Rigo, Frank, Yeo, Gene W.
Publicado 2016

Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry

por Colle, Marivi, Leisner, Courtney P, Wai, Ching Man, Ou, Shujun, Bird, Kevin A, Wang, Jie, Wisecaver, Jennifer H, Yocca, Alan E, Alger, Elizabeth I, Tang, Haibao, Xiong, Zhiyong, Callow, Pete, Ben-Zvi, Gil, Brodt, Avital, Baruch, Kobi, Swale, Thomas, Shiue, Lily, Song, Guo-qing, Childs, Kevin L, Schilmiller, Anthony, Vorsa, Nicholi, Buell, C Robin, VanBuren, Robert, Jiang, Ning, Edger, Patrick P
Publicado 2019

Evolution of the ancestral mammalian karyotype and syntenic regions

por Damas, Joana, Corbo, Marco, Kim, Jaebum, Turner-Maier, Jason, Farré, Marta, Larkin, Denis M., Ryder, Oliver A., Steiner, Cynthia, Houck, Marlys L., Hall, Shaune, Shiue, Lily, Thomas, Stephen, Swale, Thomas, Daly, Mark, Korlach, Jonas, Uliano-Silva, Marcela, Mazzoni, Camila J., Birren, Bruce W., Genereux, Diane P., Johnson, Jeremy, Lindblad-Toh, Kerstin, Karlsson, Elinor K., Nweeia, Martin T., Johnson, Rebecca N., Lewin, Harris A.
Publicado 2022

Origin and evolution of the octoploid strawberry genome

por Edger, Patrick P., Poorten, Thomas J., VanBuren, Robert, Hardigan, Michael A., Colle, Marivi, McKain, Michael R., Smith, Ronald D., Teresi, Scott J., Nelson, Andrew D. L., Wai, Ching Man, Alger, Elizabeth I., Bird, Kevin A., Yocca, Alan E., Pumplin, Nathan, Ou, Shujun, Ben-Zvi, Gil, Brodt, Avital, Baruch, Kobi, Swale, Thomas, Shiue, Lily, Acharya, Charlotte B., Cole, Glenn S., Mower, Jeffrey P., Childs, Kevin L., Jiang, Ning, Lyons, Eric, Freeling, Michael, Puzey, Joshua R., Knapp, Steven J.
Publicado 2019

Author Correction: Origin and evolution of the octoploid strawberry genome

por Edger, Patrick P., Poorten, Thomas J., VanBuren, Robert, Hardigan, Michael A., Colle, Marivi, McKain, Michael R., Smith, Ronald D., Teresi, Scott J., Nelson, Andrew D. L., Wai, Ching Man, Alger, Elizabeth I., Bird, Kevin A., Yocca, Alan E., Pumplin, Nathan, Ou, Shujun, Ben-Zvi, Gil, Brodt, Avital, Baruch, Kobi, Swale, Thomas, Shiue, Lily, Acharya, Charlotte B., Cole, Glenn S., Mower, Jeffrey P., Childs, Kevin L., Jiang, Ning, Lyons, Eric, Freeling, Michael, Puzey, Joshua R., Knapp, Steven J.
Publicado 2019

Quaking promotes monocyte differentiation into pro-atherogenic macrophages by controlling pre-mRNA splicing and gene expression

por de Bruin, Ruben G., Shiue, Lily, Prins, Jurriën, de Boer, Hetty C., Singh, Anjana, Fagg, W. Samuel, van Gils, Janine M., Duijs, Jacques M. G. J., Katzman, Sol, Kraaijeveld, Adriaan O., Böhringer, Stefan, Leung, Wai Y., Kielbasa, Szymon M., Donahue, John P., van der Zande, Patrick H.J., Sijbom, Rick, van Alem, Carla M. A., Bot, Ilze, van Kooten, Cees, Jukema, J. Wouter, Van Esch, Hilde, Rabelink, Ton J., Kazan, Hilal, Biessen, Erik A. L., Ares Jr., Manuel, van Zonneveld, Anton Jan, van der Veer, Eric P.
Publicado 2016