Model selection in genomics.

por Shmulevich, Ilya
Publicado 2003

Large-scale molecular characterization and analysis of gastric cancer

por Shmulevich, Ilya
Publicado 2014

Genomic signal processing

por Shmulevich, Ilya, Dougherty, Edward R
Publicado 2007

ProbCD: enrichment analysis accounting for categorization uncertainty

por Vêncio, Ricardo ZN, Shmulevich, Ilya
Publicado 2007

On the Limitations of Biological Knowledge

por Dougherty, Edward R, Shmulevich, Ilya
Publicado 2012

Solving the influence maximization problem reveals regulatory organization of the yeast cell cycle

por Gibbs, David L., Shmulevich, Ilya
Publicado 2017

Characterizing the Impact of Communication on Cellular and Collective Behavior Using a Three-Dimensional Multiscale Cellular Model

por Echlin, Moriah, Aguilar, Boris, Shmulevich, Ilya
Publicado 2023

Probabilistic Inference of Transcription Factor Binding from Multiple Data Sources

por Lähdesmäki, Harri, Rust, Alistair G., Shmulevich, Ilya
Publicado 2008

Computational capabilities of a multicellular reservoir computing system

por Nikolić, Vladimir, Echlin, Moriah, Aguilar, Boris, Shmulevich, Ilya
Publicado 2023

Systems biology driven software design for the research enterprise

por Boyle, John, Cavnor, Christopher, Killcoyne, Sarah, Shmulevich, Ilya
Publicado 2008

Trade-off between Responsiveness and Noise Suppression in Biomolecular System Responses to Environmental Cues

por Ratushny, Alexander V., Shmulevich, Ilya, Aitchison, John D.
Publicado 2011

Increasing Coverage of Transcription Factor Position Weight Matrices through Domain-level Homology

por Bernard, Brady, Thorsson, Vesteinn, Rovira, Hector, Shmulevich, Ilya
Publicado 2012

EPEPT: A web service for enhanced P-value estimation in permutation tests

por Knijnenburg, Theo A, Lin, Jake, Rovira, Hector, Boyle, John, Shmulevich, Ilya
Publicado 2011

A multilevel pan-cancer map links gene mutations to cancer hallmarks

por Knijnenburg, Theo A., Bismeijer, Tycho, Wessels, Lodewyk F. A., Shmulevich, Ilya
Publicado 2015

Multiscale mutation clustering algorithm identifies pan-cancer mutational clusters associated with pathway-level changes in gene expression

por Poole, William, Leinonen, Kalle, Shmulevich, Ilya, Knijnenburg, Theo A., Bernard, Brady
Publicado 2017

Flexibility of Boolean Network Reservoir Computers in Approximating Arbitrary Recursive and Non-Recursive Binary Filters

por Echlin, Moriah, Aguilar, Boris, Notarangelo, Max, Gibbs, David L., Shmulevich, Ilya
Publicado 2018

Probabilistic boolean networks predict transcription factor targets to induce transdifferentiation

por Tercan, Bahar, Aguilar, Boris, Huang, Sui, Dougherty, Edward R., Shmulevich, Ilya
Publicado 2022

Steady-State Analysis of Genetic Regulatory Networks Modelled by Probabilistic Boolean Networks

por Shmulevich, Ilya, Gluhovsky, Ilya, Hashimoto, Ronaldo F., Dougherty, Edward R., Zhang, Wei
Publicado 2003

Using cell fate attractors to uncover transcriptional regulation of HL60 neutrophil differentiation

por Huang, Albert C, Hu, Limei, Kauffman, Stuart A, Zhang, Wei, Shmulevich, Ilya
Publicado 2009

Adaptable data management for systems biology investigations

por Boyle, John, Rovira, Hector, Cavnor, Chris, Burdick, David, Killcoyne, Sarah, Shmulevich, Ilya
Publicado 2009