Context-dependent DNA polymerization effects can masquerade as DNA modification signals

por Takahashi, Yusuke, Shoura, Massa, Fire, Andrew, Morishita, Shinichi
Publicado 2022

Deconvolution of nucleic-acid length distributions: a gel electrophoresis analysis tool and applications

por Ziraldo, Riccardo, Shoura, Massa J, Fire, Andrew Z, Levene, Stephen D
Publicado 2019

Loop-closure kinetics reveal a stable, right-handed DNA intermediate in Cre recombination

por Shoura, Massa J, Giovan, Stefan M, Vetcher, Alexandre A, Ziraldo, Riccardo, Hanke, Andreas, Levene, Stephen D
Publicado 2020

Intricate and Cell Type-Specific Populations of Endogenous Circular DNA (eccDNA) in Caenorhabditis elegans and Homo sapiens

por Shoura, Massa J., Gabdank, Idan, Hansen, Loren, Merker, Jason, Gotlib, Jason, Levene, Stephen D., Fire, Andrew Z.
Publicado 2017

Measurements of DNA-loop formation via Cre-mediated recombination

por Shoura, Massa J., Vetcher, Alexandre A., Giovan, Stefan M., Bardai, Farah, Bharadwaj, Anusha, Kesinger, Matthew R., Levene, Stephen D.
Publicado 2012

An Extensive Meta-Metagenomic Search Identifies SARS-CoV-2-Homologous Sequences in Pangolin Lung Viromes

por Wahba, Lamia, Jain, Nimit, Fire, Andrew Z., Shoura, Massa J., Artiles, Karen L., McCoy, Matthew J., Jeong, Dae-Eun
Publicado 2020

Securing the future of research computing in the biosciences

por Leng, Joanna, Shoura, Massa, McLeish, Tom C. B., Real, Alan N., Hardey, Mariann, McCafferty, James, Ranson, Neil A., Harris, Sarah A.
Publicado 2019

Recompleting the Caenorhabditis elegans genome

por Yoshimura, Jun, Ichikawa, Kazuki, Shoura, Massa J., Artiles, Karen L., Gabdank, Idan, Wahba, Lamia, Smith, Cheryl L., Edgley, Mark L., Rougvie, Ann E., Fire, Andrew Z., Morishita, Shinichi, Schwarz, Erich M.
Publicado 2019

mRNA vaccination compared to infection elicits an IgG-predominant response with greater SARS-CoV-2 specificity and similar decrease in variant spike recognition

por Röltgen, Katharina, Nielsen, Sandra C. A., Arunachalam, Prabhu S., Yang, Fan, Hoh, Ramona A., Wirz, Oliver F., Lee, Alexandra S., Gao, Fei, Mallajosyula, Vamsee, Li, Chunfeng, Haraguchi, Emily, Shoura, Massa J., Wilbur, James L., Wohlstadter, Jacob N., Davis, Mark M., Pinsky, Benjamin A., Sigal, George B., Pulendran, Bali, Nadeau, Kari C., Boyd, Scott D.
Publicado 2021

Immune imprinting, breadth of variant recognition, and germinal center response in human SARS-CoV-2 infection and vaccination

por Röltgen, Katharina, Nielsen, Sandra C.A., Silva, Oscar, Younes, Sheren F., Zaslavsky, Maxim, Costales, Cristina, Yang, Fan, Wirz, Oliver F., Solis, Daniel, Hoh, Ramona A., Wang, Aihui, Arunachalam, Prabhu S., Colburg, Deana, Zhao, Shuchun, Haraguchi, Emily, Lee, Alexandra S., Shah, Mihir M., Manohar, Monali, Chang, Iris, Gao, Fei, Mallajosyula, Vamsee, Li, Chunfeng, Liu, James, Shoura, Massa J., Sindher, Sayantani B., Parsons, Ella, Dashdorj, Naranjargal J., Dashdorj, Naranbaatar D., Monroe, Robert, Serrano, Geidy E., Beach, Thomas G., Chinthrajah, R. Sharon, Charville, Gregory W., Wilbur, James L., Wohlstadter, Jacob N., Davis, Mark M., Pulendran, Bali, Troxell, Megan L., Sigal, George B., Natkunam, Yasodha, Pinsky, Benjamin A., Nadeau, Kari C., Boyd, Scott D.
Publicado 2022

Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy

por Parikh, Victoria N., Ioannidis, Alexander G., Jimenez-Morales, David, Gorzynski, John E., De Jong, Hannah N., Liu, Xiran, Roque, Jonasel, Cepeda-Espinoza, Victoria P., Osoegawa, Kazutoyo, Hughes, Chris, Sutton, Shirley C., Youlton, Nathan, Joshi, Ruchi, Amar, David, Tanigawa, Yosuke, Russo, Douglas, Wong, Justin, Lauzon, Jessie T., Edelson, Jacob, Mas Montserrat, Daniel, Kwon, Yongchan, Rubinacci, Simone, Delaneau, Olivier, Cappello, Lorenzo, Kim, Jaehee, Shoura, Massa J., Raja, Archana N., Watson, Nathaniel, Hammond, Nathan, Spiteri, Elizabeth, Mallempati, Kalyan C., Montero-Martín, Gonzalo, Christle, Jeffrey, Kim, Jennifer, Kirillova, Anna, Seo, Kinya, Huang, Yong, Zhao, Chunli, Moreno-Grau, Sonia, Hershman, Steven G., Dalton, Karen P., Zhen, Jimmy, Kamm, Jack, Bhatt, Karan D., Isakova, Alina, Morri, Maurizio, Ranganath, Thanmayi, Blish, Catherine A., Rogers, Angela J., Nadeau, Kari, Yang, Samuel, Blomkalns, Andra, O’Hara, Ruth, Neff, Norma F., DeBoever, Christopher, Szalma, Sándor, Wheeler, Matthew T., Gates, Christian M., Farh, Kyle, Schroth, Gary P., Febbo, Phil, deSouza, Francis, Cornejo, Omar E., Fernandez-Vina, Marcelo, Kistler, Amy, Palacios, Julia A., Pinsky, Benjamin A., Bustamante, Carlos D., Rivas, Manuel A., Ashley, Euan A.
Publicado 2022