Combining probabilistic alignments with read pair information improves accuracy of split-alignments

por Shrestha, Anish M S, Yoshikawa, Naruki, Asai, Kiyoshi
Publicado 2018

Protein embeddings improve phage-host interaction prediction

por Gonzales, Mark Edward M., Ureta, Jennifer C., Shrestha, Anish M. S.
Publicado 2023

Jointly aligning a group of DNA reads improves accuracy of identifying large deletions

por Shrestha, Anish M S, Frith, Martin C, Asai, Kiyoshi, Richard, Hugues
Publicado 2018

Assembly-free rapid differential gene expression analysis in non-model organisms using DNA-protein alignment

por Shrestha, Anish M.S., B. Guiao, Joyce Emlyn, R. Santiago, Kyle Christian
Publicado 2022

Comparative transcriptome profiling of heat stress response of the mangrove crab Scylla serrata across sites of varying climate profiles

por Shrestha, Anish M.S., I. Lilagan, Crissa Ann, B. Guiao, Joyce Emlyn, R. Romana-Eguia, Maria Rowena, Ablan Lagman, Ma. Carmen
Publicado 2021