Archiving next generation sequencing data

por Shumway, Martin, Cochrane, Guy, Sugawara, Hideaki
Publicado 2010

The Sequence Read Archive

por Leinonen, Rasko, Sugawara, Hideaki, Shumway, Martin
Publicado 2011

The sequence read archive: explosive growth of sequencing data

por Kodama, Yuichi, Shumway, Martin, Leinonen, Rasko
Publicado 2012

Versatile and open software for comparing large genomes

por Kurtz, Stefan, Phillippy, Adam, Delcher, Arthur L, Smoot, Michael, Shumway, Martin, Antonescu, Corina, Salzberg, Steven L
Publicado 2004

Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance

por Timme, Ruth E., Rand, Hugh, Shumway, Martin, Trees, Eija K., Simmons, Mustafa, Agarwala, Richa, Davis, Steven, Tillman, Glenn E., Defibaugh-Chavez, Stephanie, Carleton, Heather A., Klimke, William A., Katz, Lee S.
Publicado 2017

FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science

por Sichtig, Heike, Minogue, Timothy, Yan, Yi, Stefan, Christopher, Hall, Adrienne, Tallon, Luke, Sadzewicz, Lisa, Nadendla, Suvarna, Klimke, William, Hatcher, Eneida, Shumway, Martin, Aldea, Dayanara Lebron, Allen, Jonathan, Koehler, Jeffrey, Slezak, Tom, Lovell, Stephen, Schoepp, Randal, Scherf, Uwe
Publicado 2019

Database resources of the National Center for Biotechnology Information

por Wheeler, David L., Barrett, Tanya, Benson, Dennis A., Bryant, Stephen H., Canese, Kathi, Chetvernin, Vyacheslav, Church, Deanna M., DiCuccio, Michael, Edgar, Ron, Federhen, Scott, Feolo, Michael, Geer, Lewis Y., Helmberg, Wolfgang, Kapustin, Yuri, Khovayko, Oleg, Landsman, David, Lipman, David J., Madden, Thomas L., Maglott, Donna R., Miller, Vadim, Ostell, James, Pruitt, Kim D., Schuler, Gregory D., Shumway, Martin, Sequeira, Edwin, Sherry, Steven T., Sirotkin, Karl, Souvorov, Alexandre, Starchenko, Grigory, Tatusov, Roman L., Tatusova, Tatiana A., Wagner, Lukas, Yaschenko, Eugene
Publicado 2008

Database resources of the National Center for Biotechnology Information

por Sayers, Eric W., Barrett, Tanya, Benson, Dennis A., Bryant, Stephen H., Canese, Kathi, Chetvernin, Vyacheslav, Church, Deanna M., DiCuccio, Michael, Edgar, Ron, Federhen, Scott, Feolo, Michael, Geer, Lewis Y., Helmberg, Wolfgang, Kapustin, Yuri, Landsman, David, Lipman, David J., Madden, Thomas L., Maglott, Donna R., Miller, Vadim, Mizrachi, Ilene, Ostell, James, Pruitt, Kim D., Schuler, Gregory D., Sequeira, Edwin, Sherry, Stephen T., Shumway, Martin, Sirotkin, Karl, Souvorov, Alexandre, Starchenko, Grigory, Tatusova, Tatiana A., Wagner, Lukas, Yaschenko, Eugene, Ye, Jian
Publicado 2009

Database resources of the National Center for Biotechnology Information

por Sayers, Eric W., Barrett, Tanya, Benson, Dennis A., Bryant, Stephen H., Canese, Kathi, Chetvernin, Vyacheslav, Church, Deanna M., DiCuccio, Michael, Edgar, Ron, Federhen, Scott, Feolo, Michael, Geer, Lewis Y., Helmberg, Wolfgang, Kapustin, Yuri, Landsman, David, Lipman, David J., Madden, Thomas L., Maglott, Donna R., Miller, Vadim, Mizrachi, Ilene, Ostell, James, Pruitt, Kim D., Schuler, Gregory D., Sequeira, Edwin, Sherry, Stephen T., Shumway, Martin, Sirotkin, Karl, Souvorov, Alexandre, Starchenko, Grigory, Tatusova, Tatiana A., Wagner, Lukas, Yaschenko, Eugene, Ye, Jian
Publicado 2009

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99(A)

por Salzberg, Steven L, Sommer, Daniel D, Schatz, Michael C, Phillippy, Adam M, Rabinowicz, Pablo D, Tsuge, Seiji, Furutani, Ayako, Ochiai, Hirokazu, Delcher, Arthur L, Kelley, David, Madupu, Ramana, Puiu, Daniela, Radune, Diana, Shumway, Martin, Trapnell, Cole, Aparna, Gudlur, Jha, Gopaljee, Pandey, Alok, Patil, Prabhu B, Ishihara, Hiromichi, Meyer, Damien F, Szurek, Boris, Verdier, Valerie, Koebnik, Ralf, Dow, J Maxwell, Ryan, Robert P, Hirata, Hisae, Tsuyumu, Shinji, Won Lee, Sang, Ronald, Pamela C, Sonti, Ramesh V, Van Sluys, Marie-Anne, Leach, Jan E, White, Frank F, Bogdanove, Adam J
Publicado 2008

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99(A)

por Salzberg, Steven L, Sommer, Daniel D, Schatz, Michael C, Phillippy, Adam M, Rabinowicz, Pablo D, Tsuge, Seiji, Furutani, Ayako, Ochiai, Hirokazu, Delcher, Arthur L, Kelley, David, Madupu, Ramana, Puiu, Daniela, Radune, Diana, Shumway, Martin, Trapnell, Cole, Aparna, Gudlur, Jha, Gopaljee, Pandey, Alok, Patil, Prabhu B, Ishihara, Hiromichi, Meyer, Damien F, Szurek, Boris, Verdier, Valerie, Koebnik, Ralf, Dow, J Maxwell, Ryan, Robert P, Hirata, Hisae, Tsuyumu, Shinji, Lee, Sang Won, Seo, Young-Su, Sriariyanum, Malinee, Ronald, Pamela C, Sonti, Ramesh V, Van Sluys, Marie-Anne, Leach, Jan E, White, Frank F, Bogdanove, Adam J
Publicado 2008

Database resources of the National Center for Biotechnology Information

por Sayers, Eric W., Barrett, Tanya, Benson, Dennis A., Bolton, Evan, Bryant, Stephen H., Canese, Kathi, Chetvernin, Vyacheslav, Church, Deanna M., DiCuccio, Michael, Federhen, Scott, Feolo, Michael, Geer, Lewis Y., Helmberg, Wolfgang, Kapustin, Yuri, Landsman, David, Lipman, David J., Lu, Zhiyong, Madden, Thomas L., Madej, Tom, Maglott, Donna R., Marchler-Bauer, Aron, Miller, Vadim, Mizrachi, Ilene, Ostell, James, Panchenko, Anna, Pruitt, Kim D., Schuler, Gregory D., Sequeira, Edwin, Sherry, Stephen T., Shumway, Martin, Sirotkin, Karl, Slotta, Douglas, Souvorov, Alexandre, Starchenko, Grigory, Tatusova, Tatiana A., Wagner, Lukas, Wang, Yanli, John Wilbur, W., Yaschenko, Eugene, Ye, Jian
Publicado 2010

Database resources of the National Center for Biotechnology Information

por Sayers, Eric W., Barrett, Tanya, Benson, Dennis A., Bolton, Evan, Bryant, Stephen H., Canese, Kathi, Chetvernin, Vyacheslav, Church, Deanna M., DiCuccio, Michael, Federhen, Scott, Feolo, Michael, Fingerman, Ian M., Geer, Lewis Y., Helmberg, Wolfgang, Kapustin, Yuri, Landsman, David, Lipman, David J., Lu, Zhiyong, Madden, Thomas L., Madej, Tom, Maglott, Donna R., Marchler-Bauer, Aron, Miller, Vadim, Mizrachi, Ilene, Ostell, James, Panchenko, Anna, Phan, Lon, Pruitt, Kim D., Schuler, Gregory D., Sequeira, Edwin, Sherry, Stephen T., Shumway, Martin, Sirotkin, Karl, Slotta, Douglas, Souvorov, Alexandre, Starchenko, Grigory, Tatusova, Tatiana A., Wagner, Lukas, Wang, Yanli, Wilbur, W. John, Yaschenko, Eugene, Ye, Jian
Publicado 2011

Database resources of the National Center for Biotechnology Information

por Sayers, Eric W., Barrett, Tanya, Benson, Dennis A., Bolton, Evan, Bryant, Stephen H., Canese, Kathi, Chetvernin, Vyacheslav, Church, Deanna M., DiCuccio, Michael, Federhen, Scott, Feolo, Michael, Fingerman, Ian M., Geer, Lewis Y., Helmberg, Wolfgang, Kapustin, Yuri, Krasnov, Sergey, Landsman, David, Lipman, David J., Lu, Zhiyong, Madden, Thomas L., Madej, Tom, Maglott, Donna R., Marchler-Bauer, Aron, Miller, Vadim, Karsch-Mizrachi, Ilene, Ostell, James, Panchenko, Anna, Phan, Lon, Pruitt, Kim D., Schuler, Gregory D., Sequeira, Edwin, Sherry, Stephen T., Shumway, Martin, Sirotkin, Karl, Slotta, Douglas, Souvorov, Alexandre, Starchenko, Grigory, Tatusova, Tatiana A., Wagner, Lukas, Wang, Yanli, Wilbur, W. John, Yaschenko, Eugene, Ye, Jian
Publicado 2012

Database resources of the National Center for Biotechnology Information

por Acland, Abigail, Agarwala, Richa, Barrett, Tanya, Beck, Jeff, Benson, Dennis A., Bollin, Colleen, Bolton, Evan, Bryant, Stephen H., Canese, Kathi, Church, Deanna M., Clark, Karen, DiCuccio, Michael, Dondoshansky, Ilya, Federhen, Scott, Feolo, Michael, Geer, Lewis Y., Gorelenkov, Viatcheslav, Hoeppner, Marilu, Johnson, Mark, Kelly, Christopher, Khotomlianski, Viatcheslav, Kimchi, Avi, Kimelman, Michael, Kitts, Paul, Krasnov, Sergey, Kuznetsov, Anatoliy, Landsman, David, Lipman, David J., Lu, Zhiyong, Madden, Thomas L., Madej, Tom, Maglott, Donna R., Marchler-Bauer, Aron, Karsch-Mizrachi, Ilene, Murphy, Terence, Ostell, James, O'Sullivan, Christopher, Panchenko, Anna, Phan, Lon, Pruitt, Don Preussm Kim D., Rubinstein, Wendy, Sayers, Eric W., Schneider, Valerie, Schuler, Gregory D., Sequeira, Edwin, Sherry, Stephen T., Shumway, Martin, Sirotkin, Karl, Siyan, Karanjit, Slotta, Douglas, Soboleva, Alexandra, Soussov, Vladimir, Starchenko, Grigory, Tatusova, Tatiana A., Trawick, Bart W., Vakatov, Denis, Wang, Yanli, Ward, Minghong, John Wilbur, W., Yaschenko, Eugene, Zbicz, Kerry
Publicado 2014

Genomic insights into the Ixodes scapularis tick vector of Lyme disease

por Gulia-Nuss, Monika, Nuss, Andrew B., Meyer, Jason M., Sonenshine, Daniel E., Roe, R. Michael, Waterhouse, Robert M., Sattelle, David B., de la Fuente, José, Ribeiro, Jose M., Megy, Karine, Thimmapuram, Jyothi, Miller, Jason R., Walenz, Brian P., Koren, Sergey, Hostetler, Jessica B., Thiagarajan, Mathangi, Joardar, Vinita S., Hannick, Linda I., Bidwell, Shelby, Hammond, Martin P., Young, Sarah, Zeng, Qiandong, Abrudan, Jenica L., Almeida, Francisca C., Ayllón, Nieves, Bhide, Ketaki, Bissinger, Brooke W., Bonzon-Kulichenko, Elena, Buckingham, Steven D., Caffrey, Daniel R., Caimano, Melissa J., Croset, Vincent, Driscoll, Timothy, Gilbert, Don, Gillespie, Joseph J., Giraldo-Calderón, Gloria I., Grabowski, Jeffrey M., Jiang, David, Khalil, Sayed M. S., Kim, Donghun, Kocan, Katherine M., Koči, Juraj, Kuhn, Richard J., Kurtti, Timothy J., Lees, Kristin, Lang, Emma G., Kennedy, Ryan C., Kwon, Hyeogsun, Perera, Rushika, Qi, Yumin, Radolf, Justin D., Sakamoto, Joyce M., Sánchez-Gracia, Alejandro, Severo, Maiara S., Silverman, Neal, Šimo, Ladislav, Tojo, Marta, Tornador, Cristian, Van Zee, Janice P., Vázquez, Jesús, Vieira, Filipe G., Villar, Margarita, Wespiser, Adam R., Yang, Yunlong, Zhu, Jiwei, Arensburger, Peter, Pietrantonio, Patricia V., Barker, Stephen C., Shao, Renfu, Zdobnov, Evgeny M., Hauser, Frank, Grimmelikhuijzen, Cornelis J. P., Park, Yoonseong, Rozas, Julio, Benton, Richard, Pedra, Joao H. F., Nelson, David R., Unger, Maria F., Tubio, Jose M. C., Tu, Zhijian, Robertson, Hugh M., Shumway, Martin, Sutton, Granger, Wortman, Jennifer R., Lawson, Daniel, Wikel, Stephen K., Nene, Vishvanath M., Fraser, Claire M., Collins, Frank H., Birren, Bruce, Nelson, Karen E., Caler, Elisabet, Hill, Catherine A.
Publicado 2016