SPECS: Integration of side-chain orientation and global distance-based measures for improved evaluation of protein structural models

por Alapati, Rahul, Shuvo, Md. Hossain, Bhattacharya, Debswapna
Publicado 2020

QDeep: distance-based protein model quality estimation by residue-level ensemble error classifications using stacked deep residual neural networks

por Shuvo, Md Hossain, Bhattacharya, Sutanu, Bhattacharya, Debswapna
Publicado 2020

DeepRefiner: high-accuracy protein structure refinement by deep network calibration

por Shuvo, Md Hossain, Gulfam, Muhammad, Bhattacharya, Debswapna
Publicado 2021

PIQLE: protein–protein interface quality estimation by deep graph learning of multimeric interaction geometries

por Shuvo, Md Hossain, Karim, Mohimenul, Roche, Rahmatullah, Bhattacharya, Debswapna
Publicado 2023

E(3) equivariant graph neural networks for robust and accurate protein-protein interaction site prediction

por Roche, Rahmatullah, Moussad, Bernard, Shuvo, Md Hossain, Bhattacharya, Debswapna
Publicado 2023

Recent Advances in Protein Homology Detection Propelled by Inter-Residue Interaction Map Threading

por Bhattacharya, Sutanu, Roche, Rahmatullah, Shuvo, Md Hossain, Bhattacharya, Debswapna
Publicado 2021

PIQLE: protein-protein interface quality estimation by deep graph learning of multimeric interaction geometries

por Shuvo, Md Hossain, Karim, Mohimenul, Roche, Rahmatullah, Bhattacharya, Debswapna
Publicado 2023

EquiPNAS: improved protein-nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks

por Roche, Rahmatullah, Moussad, Bernard, Shuvo, Md Hossain, Tarafder, Sumit, Bhattacharya, Debswapna
Publicado 2023