SDRS—an algorithm for analyzing large-scale dose–response data

por Ji, Rui-Ru, Siemers, Nathan O., Lei, Ming, Schweizer, Liang, Bruccoleri, Robert E.
Publicado 2011

Exome Sequencing Reveals Comprehensive Genomic Alterations across Eight Cancer Cell Lines

por Chang, Han, Jackson, Donald G., Kayne, Paul S., Ross-Macdonald, Petra B., Ryseck, Rolf-Peter, Siemers, Nathan O.
Publicado 2011

Genome-wide association analysis identifies genetic correlates of immune infiltrates in solid tumors

por Siemers, Nathan O., Holloway, James L., Chang, Han, Chasalow, Scott D., Ross-MacDonald, Petra B., Voliva, Charles F., Szustakowski, Joseph D.
Publicado 2017

Nearest Neighbor Networks: clustering expression data based on gene neighborhoods

por Huttenhower, Curtis, Flamholz, Avi I, Landis, Jessica N, Sahi, Sauhard, Myers, Chad L, Olszewski, Kellen L, Hibbs, Matthew A, Siemers, Nathan O, Troyanskaya, Olga G, Coller, Hilary A
Publicado 2007

Transcriptional Profiling of the Dose Response: A More Powerful Approach for Characterizing Drug Activities

por Ji, Rui-Ru, de Silva, Heshani, Jin, Yisheng, Bruccoleri, Robert E., Cao, Jian, He, Aiqing, Huang, Wenjun, Kayne, Paul S., Neuhaus, Isaac M., Ott, Karl-Heinz, Penhallow, Becky, Cockett, Mark I., Neubauer, Michael G., Siemers, Nathan O., Ross-Macdonald, Petra
Publicado 2009

Cancer-associated fibroblasts are the main contributors to epithelial-to-mesenchymal signatures in the tumor microenvironment

por Szabo, Peter M., Vajdi, Amir, Kumar, Namit, Tolstorukov, Michael Y., Chen, Benjamin J., Edwards, Robin, Ligon, Keith L., Chasalow, Scott D., Chow, Kin-Hoe, Shetty, Aniket, Bolisetty, Mohan, Holloway, James L., Golhar, Ryan, Kidd, Brian A., Hull, Philip Ansumana, Houser, Jeff, Vlach, Logan, Siemers, Nathan O., Saha, Saurabh
Publicado 2023