Scientific selection: A century of increasing crop varietal diversity in US wheat

por Chai, Yuan, Pardey, Philip G., Silverstein, Kevin A. T.
Publicado 2022

Genomic Characterization of the LEED..PEEDs, a Gene Family Unique to the Medicago Lineage

por Trujillo, Diana I., Silverstein, Kevin A. T., Young, Nevin D.
Publicado 2014

Polymorphisms within the Telomerase Reverse Transcriptase gene (TERT) in four breeds of dogs selected for difference in lifespan and cancer susceptibility

por McAloney, Camille A, Silverstein, Kevin A T, Modiano, Jaime F, Bagchi, Anindya
Publicado 2014

ScanIndel: a hybrid framework for indel detection via gapped alignment, split reads and de novo assembly

por Yang, Rendong, Nelson, Andrew C., Henzler, Christine, Thyagarajan, Bharat, Silverstein, Kevin A. T.
Publicado 2015

ODG: Omics database generator - a tool for generating, querying, and analyzing multi-omics comparative databases to facilitate biological understanding

por Guhlin, Joseph, Silverstein, Kevin A. T., Zhou, Peng, Tiffin, Peter, Young, Nevin D.
Publicado 2017

Gene Regulation Shifts Shed Light on Fungal Adaption in Plant Biomass Decomposers

por Zhang, Jiwei, Silverstein, Kevin A. T., Castaño, Jesus David, Figueroa, Melania, Schilling, Jonathan S.
Publicado 2019

Correction to: Polymorphisms within the Telomerase Reverse Transcriptase gene (TERT) in four breeds of dogs selected for difference in lifespan and cancer susceptibility

por McAloney, Camille A., Silverstein, Kevin A. T., Modiano, Jaime F., Bagchi, Anindya
Publicado 2021

TAPDANCE: An automated tool to identify and annotate transposon insertion CISs and associations between CISs from next generation sequence data

por Sarver, Aaron L, Erdman, Jesse, Starr, Tim, Largaespada, David A, Silverstein, Kevin A T
Publicado 2012

Patterns of divergence of a large family of nodule cysteine-rich peptides in accessions of Medicago truncatula

por Nallu, Sumitha, Silverstein, Kevin A T, Zhou, Peng, Young, Nevin D, VandenBosch, Kathryn A
Publicado 2014

Regulatory Patterns of a Large Family of Defensin-Like Genes Expressed in Nodules of Medicago truncatula

por Nallu, Sumitha, Silverstein, Kevin A. T., Samac, Deborah A., Bucciarelli, Bruna, Vance, Carroll P., VandenBosch, Kathryn A.
Publicado 2013

Cross platform analysis of methylation, miRNA and stem cell gene expression data in germ cell tumors highlights characteristic differences by tumor histology

por Poynter, Jenny N., Bestrashniy, Jessica R. B. M., Silverstein, Kevin A. T., Hooten, Anthony J., Lees, Christopher, Ross, Julie A., Tolar, Jakub
Publicado 2015

New methods for finding common insertion sites and co-occurring common insertion sites in transposon- and virus-based genetic screens

por Bergemann, Tracy L., Starr, Timothy K., Yu, Haoyu, Steinbach, Michael, Erdmann, Jesse, Chen, Yun, Cormier, Robert T., Largaespada, David A., Silverstein, Kevin A. T.
Publicado 2012

Implementation of Cloud based Next Generation Sequencing data analysis in a clinical laboratory

por Onsongo, Getiria, Erdmann, Jesse, Spears, Michael D, Chilton, John, Beckman, Kenneth B, Hauge, Adam, Yohe, Sophia, Schomaker, Matthew, Bower, Matthew, Silverstein, Kevin A T, Thyagarajan, Bharat
Publicado 2014

The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry

por Howard, Nicholas P., Peace, Cameron, Silverstein, Kevin A. T., Poets, Ana, Luby, James J., Vanderzande, Stijn, Durel, Charles-Eric, Muranty, Hélène, Denancé, Caroline, van de Weg, Eric
Publicado 2021

AR intragenic deletions linked to androgen receptor splice variant expression and activity in models of prostate cancer progression

por Li, Yingming, Hwang, Tae Hyun, Oseth, LeAnn, Hauge, Adam, Vessella, Robert L., Schmechel, Stephen C., Hirsch, Betsy, Beckman, Kenneth B., Silverstein, Kevin A., Dehm, Scott M.
Publicado 2012

Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula

por Moll, Karen M., Zhou, Peng, Ramaraj, Thiruvarangan, Fajardo, Diego, Devitt, Nicholas P., Sadowsky, Michael J., Stupar, Robert M., Tiffin, Peter, Miller, Jason R., Young, Nevin D., Silverstein, Kevin A. T., Mudge, Joann
Publicado 2017

Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes

por Zhou, Peng, Silverstein, Kevin A. T., Ramaraj, Thiruvarangan, Guhlin, Joseph, Denny, Roxanne, Liu, Junqi, Farmer, Andrew D., Steele, Kelly P., Stupar, Robert M., Miller, Jason R., Tiffin, Peter, Mudge, Joann, Young, Nevin D.
Publicado 2017

Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation

por Li, Feng, Upadhyaya, Narayana M., Sperschneider, Jana, Matny, Oadi, Nguyen-Phuc, Hoa, Mago, Rohit, Raley, Castle, Miller, Marisa E., Silverstein, Kevin A. T., Henningsen, Eva, Hirsch, Cory D., Visser, Botma, Pretorius, Zacharias A., Steffenson, Brian J., Schwessinger, Benjamin, Dodds, Peter N., Figueroa, Melania
Publicado 2019

The genome of the zebra mussel, Dreissena polymorpha: a resource for comparative genomics, invasion genetics, and biocontrol

por McCartney, Michael A, Auch, Benjamin, Kono, Thomas, Mallez, Sophie, Zhang, Ying, Obille, Angelico, Becker, Aaron, Abrahante, Juan E, Garbe, John, Badalamenti, Jonathan P, Herman, Adam, Mangelson, Hayley, Liachko, Ivan, Sullivan, Shawn, Sone, Eli D, Koren, Sergey, Silverstein, Kevin A T, Beckman, Kenneth B, Gohl, Daryl M
Publicado 2021

Hybrid assembly with long and short reads improves discovery of gene family expansions

por Miller, Jason R., Zhou, Peng, Mudge, Joann, Gurtowski, James, Lee, Hayan, Ramaraj, Thiruvarangan, Walenz, Brian P., Liu, Junqi, Stupar, Robert M., Denny, Roxanne, Song, Li, Singh, Namrata, Maron, Lyza G., McCouch, Susan R., McCombie, W. Richard, Schatz, Michael C., Tiffin, Peter, Young, Nevin D., Silverstein, Kevin A. T.
Publicado 2017