A Chromosome-Scale Assembly of the Bactrocera cucurbitae Genome Provides Insight to the Genetic Basis of white pupae

por Sim, Sheina B., Geib, Scott M.
Publicado 2017

Whole Genome Sequencing of the Braconid Parasitoid Wasp Fopius arisanus, an Important Biocontrol Agent of Pest Tepritid Fruit Flies

por Geib, Scott M., Liang, Guang Hong, Murphy, Terence D., Sim, Sheina B.
Publicado 2017

A New Diagnostic Resource for Ceratitis capitata Strain Identification Based on QTL Mapping

por Sim, Sheina B., Ruiz-Arce, Raul, Barr, Norman B., Geib, Scott M.
Publicado 2017

HiFiAdapterFilt, a memory efficient read processing pipeline, prevents occurrence of adapter sequence in PacBio HiFi reads and their negative impacts on genome assembly

por Sim, Sheina B., Corpuz, Renee L., Simmonds, Tyler J., Geib, Scott M.
Publicado 2022

Reconstructing a comprehensive transcriptome assembly of a white-pupal translocated strain of the pest fruit fly Bactrocera cucurbitae

por Sim, Sheina B, Calla, Bernarda, Hall, Brian, DeRego, Theodore, Geib, Scott M
Publicado 2015

Draft Genome of the Rice Coral Montipora capitata Obtained from Linked-Read Sequencing

por Helmkampf, Martin, Bellinger, M Renee, Geib, Scott M, Sim, Sheina B, Takabayashi, Misaki
Publicado 2019

Draft Genome of the Rice CoralMontipora capitata Obtained from Linked-Read Sequencing

por Helmkampf, Martin, Renee Bellinger, M, Geib, Scott M, Sim, Sheina B, Takabayashi, Misaki
Publicado 2019

Genome Annotation Generator: a simple tool for generating and correcting WGS annotation tables for NCBI submission

por Geib, Scott M, Hall, Brian, Derego, Theodore, Bremer, Forest T, Cannoles, Kyle, Sim, Sheina B
Publicado 2018

Transcriptome of the egg parasitoid Fopius arisanus: an important biocontrol tool for Tephritid fruit fly suppression

por Calla, Bernarda, Sim, Sheina B., Hall, Brian, DeRego, Theodore, Liang, Guang Hong, Geib, Scott M.
Publicado 2015

Taro Genome Assembly and Linkage Map Reveal QTLs for Resistance to Taro Leaf Blight

por Bellinger, M. Renee, Paudel, Roshan, Starnes, Steven, Kambic, Lukas, Kantar, Michael B., Wolfgruber, Thomas, Lamour, Kurt, Geib, Scott, Sim, Sheina, Miyasaka, Susan C., Helmkampf, Martin, Shintaku, Michael
Publicado 2020

Hybridization and the spread of the apple maggot fly, Rhagoletis pomonella (Diptera: Tephritidae), in the northwestern United States

por Arcella, Tracy, Hood, Glen R, Powell, Thomas H Q, Sim, Sheina B, Yee, Wee L, Schwarz, Dietmar, Egan, Scott P, Goughnour, Robert B, Smith, James J, Feder, Jeffrey L
Publicado 2015

The USDA-ARS Ag100Pest Initiative: High-Quality Genome Assemblies for Agricultural Pest Arthropod Research

por Childers, Anna K., Geib, Scott M., Sim, Sheina B., Poelchau, Monica F., Coates, Brad S., Simmonds, Tyler J., Scully, Erin D., Smith, Timothy P. L., Childers, Christopher P., Corpuz, Renee L., Hackett, Kevin, Scheffler, Brian
Publicado 2021

White pupae phenotype of tephritids is caused by parallel mutations of a MFS transporter

por Ward, Christopher M., Aumann, Roswitha A., Whitehead, Mark A., Nikolouli, Katerina, Leveque, Gary, Gouvi, Georgia, Fung, Elisabeth, Reiling, Sarah J., Djambazian, Haig, Hughes, Margaret A., Whiteford, Sam, Caceres-Barrios, Carlos, Nguyen, Thu N. M., Choo, Amanda, Crisp, Peter, Sim, Sheina B., Geib, Scott M., Marec, František, Häcker, Irina, Ragoussis, Jiannis, Darby, Alistair C., Bourtzis, Kostas, Baxter, Simon W., Schetelig, Marc F.
Publicado 2021

The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species

por Papanicolaou, Alexie, Schetelig, Marc F., Arensburger, Peter, Atkinson, Peter W., Benoit, Joshua B., Bourtzis, Kostas, Castañera, Pedro, Cavanaugh, John P., Chao, Hsu, Childers, Christopher, Curril, Ingrid, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dolan, Amanda, Dugan, Shannon, Friedrich, Markus, Gasperi, Giuliano, Geib, Scott, Georgakilas, Georgios, Gibbs, Richard A., Giers, Sarah D., Gomulski, Ludvik M., González-Guzmán, Miguel, Guillem-Amat, Ana, Han, Yi, Hatzigeorgiou, Artemis G., Hernández-Crespo, Pedro, Hughes, Daniel S. T., Jones, Jeffery W., Karagkouni, Dimitra, Koskinioti, Panagiota, Lee, Sandra L., Malacrida, Anna R., Manni, Mosè, Mathiopoulos, Kostas, Meccariello, Angela, Murali, Shwetha C., Murphy, Terence D., Muzny, Donna M., Oberhofer, Georg, Ortego, Félix, Paraskevopoulou, Maria D., Poelchau, Monica, Qu, Jiaxin, Reczko, Martin, Robertson, Hugh M., Rosendale, Andrew J., Rosselot, Andrew E., Saccone, Giuseppe, Salvemini, Marco, Savini, Grazia, Schreiner, Patrick, Scolari, Francesca, Siciliano, Paolo, Sim, Sheina B., Tsiamis, George, Ureña, Enric, Vlachos, Ioannis S., Werren, John H., Wimmer, Ernst A., Worley, Kim C., Zacharopoulou, Antigone, Richards, Stephen, Handler, Alfred M.
Publicado 2016

Erratum to: The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive...

por Papanicolaou, Alexie, Schetelig, Marc F., Arensburger, Peter, Atkinson, Peter W., Benoit, Joshua B., Bourtzis, Kostas, Castañera, Pedro, Cavanaugh, John P., Chao, Hsu, Childers, Christopher, Curril, Ingrid, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dolan, Amanda, Dugan, Shannon, Friedrich, Markus, Gasperi, Giuliano, Geib, Scott, Georgakilas, Georgios, Gibbs, Richard A., Giers, Sarah D., Gomulski, Ludvik M., González-Guzmán, Miguel, Guillem-Amat, Ana, Han, Yi, Hatzigeorgiou, Artemis G., Hernández-Crespo, Pedro, Hughes, Daniel S. T., Jones, Jeffery W., Karagkouni, Dimitra, Koskinioti, Panagiota, Lee, Sandra L., Malacrida, Anna R., Manni, Mosè, Mathiopoulos, Kostas, Meccariello, Angela, Munoz-Torres, Monica, Murali, Shwetha C., Murphy, Terence D., Muzny, Donna M., Oberhofer, Georg, Ortego, Félix, Paraskevopoulou, Maria D., Poelchau, Monica, Qu, Jiaxin, Reczko, Martin, Robertson, Hugh M., Rosendale, Andrew J., Rosselot, Andrew E., Saccone, Giuseppe, Salvemini, Marco, Savini, Grazia, Schreiner, Patrick, Scolari, Francesca, Siciliano, Paolo, Sim, Sheina B., Tsiamis, George, Ureña, Enric, S.Vlachos, Ioannis, Werren, John H., Wimmer, Ernst A., Worley, Kim C., Zacharopoulou, Antigone, Richards, Stephen, Handler, Alfred M.
Publicado 2017