BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes

por Manni, Mosè, Berkeley, Matthew R, Seppey, Mathieu, Simão, Felipe A, Zdobnov, Evgeny M
Publicado 2021

OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs

por Kriventseva, Evgenia V, Kuznetsov, Dmitry, Tegenfeldt, Fredrik, Manni, Mosè, Dias, Renata, Simão, Felipe A, Zdobnov, Evgeny M
Publicado 2019

BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics

por Waterhouse, Robert M, Seppey, Mathieu, Simão, Felipe A, Manni, Mosè, Ioannidis, Panagiotis, Klioutchnikov, Guennadi, Kriventseva, Evgenia V, Zdobnov, Evgeny M
Publicado 2018

OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software

por Kriventseva, Evgenia V., Tegenfeldt, Fredrik, Petty, Tom J., Waterhouse, Robert M., Simão, Felipe A., Pozdnyakov, Igor A., Ioannidis, Panagiotis, Zdobnov, Evgeny M.
Publicado 2014

OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs

por Zdobnov, Evgeny M., Tegenfeldt, Fredrik, Kuznetsov, Dmitry, Waterhouse, Robert M., Simão, Felipe A., Ioannidis, Panagiotis, Seppey, Mathieu, Loetscher, Alexis, Kriventseva, Evgenia V.
Publicado 2017

Genomic Features of the Damselfly Calopteryx splendens Representing a Sister Clade to Most Insect Orders

por Ioannidis, Panagiotis, Simao, Felipe A., Waterhouse, Robert M., Manni, Mosè, Seppey, Mathieu, Robertson, Hugh M., Misof, Bernhard, Niehuis, Oliver, Zdobnov, Evgeny M.
Publicado 2017

The Genome of the Blind Soil-Dwelling and Ancestrally Wingless Dipluran Campodea augens: A Key Reference Hexapod for Studying the Emergence of Insect Innovations

por Manni, Mosè, Simao, Felipe A, Robertson, Hugh M, Gabaglio, Marco A, Waterhouse, Robert M, Misof, Bernhard, Niehuis, Oliver, Szucsich, Nikolaus U, Zdobnov, Evgeny M
Publicado 2019

MET overexpression and intratumor heterogeneity in esophageal squamous cell carcinoma

por Abboud, H.S., Camuzi, D., Rapozo, D.C., Fernandes, P.V., Nicolau-Neto, P., Guaraldi, S., Simão, T.A., Ribeiro Pinto, L.F., Gonzaga, I.M., Soares-Lima, S.C.
Publicado 2021

The potential of mRNA expression evaluation in predicting HER2 positivity in gastroesophageal cancer

por de Oliveira, I.M., Nicolau-Neto, P., Fernandes, P.V., Lavigne, T.S., Neves, P.F., Tobar, J.C., Soares-Lima, S.C., Simão, T.A., Pinto, L.F. Ribeiro
Publicado 2022

Multidrug resistance 1 gene polymorphisms may determine Crohn's disease behavior in patients from Rio de Janeiro

por Carvalho, Ana Teresa P, Fróes, Renata S B, Esberard, Barbara C, Santos, Juliana C V C, Rapozo, Davy C. M., Grinman, Ana B, Simão, Tatiana A, Neto, Pedro Nicolau, Luiz, Ronir R, Carneiro, Antonio José V, de Souza, Heitor S P, Ribeiro-Pinto, Luis Felipe
Publicado 2014

Genome Sequencing of the Phytoseiid Predatory Mite Metaseiulus occidentalis Reveals Completely Atomized Hox Genes and Superdynamic Intron Evolution

por Hoy, Marjorie A., Waterhouse, Robert M., Wu, Ke, Estep, Alden S., Ioannidis, Panagiotis, Palmer, William J., Pomerantz, Aaron F., Simão, Felipe A., Thomas, Jainy, Jiggins, Francis M., Murphy, Terence D., Pritham, Ellen J., Robertson, Hugh M., Zdobnov, Evgeny M., Gibbs, Richard A., Richards, Stephen
Publicado 2016

Genome-enabled insights into the biology of thrips as crop pests

por Rotenberg, Dorith, Baumann, Aaron A., Ben-Mahmoud, Sulley, Christiaens, Olivier, Dermauw, Wannes, Ioannidis, Panagiotis, Jacobs, Chris G. C., Vargas Jentzsch, Iris M., Oliver, Jonathan E., Poelchau, Monica F., Rajarapu, Swapna Priya, Schneweis, Derek J., Snoeck, Simon, Taning, Clauvis N. T., Wei, Dong, Widana Gamage, Shirani M. K., Hughes, Daniel S. T., Murali, Shwetha C., Bailey, Samuel T., Bejerman, Nicolas E., Holmes, Christopher J., Jennings, Emily C., Rosendale, Andrew J., Rosselot, Andrew, Hervey, Kaylee, Schneweis, Brandi A., Cheng, Sammy, Childers, Christopher, Simão, Felipe A., Dietzgen, Ralf G., Chao, Hsu, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dugan, Shannon, Han, Yi, Lee, Sandra L., Muzny, Donna M., Qu, Jiaxin, Worley, Kim C., Benoit, Joshua B., Friedrich, Markus, Jones, Jeffery W., Panfilio, Kristen A., Park, Yoonseong, Robertson, Hugh M., Smagghe, Guy, Ullman, Diane E., van der Zee, Maurijn, Van Leeuwen, Thomas, Veenstra, Jan A., Waterhouse, Robert M., Weirauch, Matthew T., Werren, John H., Whitfield, Anna E., Zdobnov, Evgeny M., Gibbs, Richard A., Richards, Stephen
Publicado 2020

Correction to: Genome-enabled insights into the biology of thrips as crop pests

por Rotenberg, Dorith, Baumann, Aaron A., Ben-Mahmoud, Sulley, Christiaens, Olivier, Dermauw, Wannes, Ioannidis, Panagiotis, Jacobs, Chris G. C., Vargas Jentzsch, Iris M., Oliver, Jonathan E., Poelchau, Monica F., Rajarapu, Swapna Priya, Schneweis, Derek J., Snoeck, Simon, Taning, Clauvis N. T., Wei, Dong, Widana Gamage, Shirani M. K., Hughes, Daniel S. T., Murali, Shwetha C., Bailey, Samuel T., Bejerman, Nicolas E., Holmes, Christopher J., Jennings, Emily C., Rosendale, Andrew J., Rosselot, Andrew, Hervey, Kaylee, Schneweis, Brandi A., Cheng, Sammy, Childers, Christopher, Simão, Felipe A., Dietzgen, Ralf G., Chao, Hsu, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dugan, Shannon, Han, Yi, Lee, Sandra L., Muzny, Donna M., Qu, Jiaxin, Worley, Kim C., Benoit, Joshua B., Friedrich, Markus, Jones, Jeffery W., Panfilio, Kristen A., Park, Yoonseong, Robertson, Hugh M., Smagghe, Guy, Ullman, Diane E., van der Zee, Maurijn, Van Leeuwen, Thomas, Veenstra, Jan A., Waterhouse, Robert M., Weirauch, Matthew T., Werren, John H., Whitfield, Anna E., Zdobnov, Evgeny M., Gibbs, Richard A., Richards, Stephen
Publicado 2020

Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera

por Oeyen, Jan Philip, Baa-Puyoulet, Patrice, Benoit, Joshua B, Beukeboom, Leo W, Bornberg-Bauer, Erich, Buttstedt, Anja, Calevro, Federica, Cash, Elizabeth I, Chao, Hsu, Charles, Hubert, Chen, Mei-Ju May, Childers, Christopher, Cridge, Andrew G, Dearden, Peter, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dolan, Amanda, Donath, Alexander, Dowling, Daniel, Dugan, Shannon, Duncan, Elizabeth, Elpidina, Elena N, Friedrich, Markus, Geuverink, Elzemiek, Gibson, Joshua D, Grath, Sonja, Grimmelikhuijzen, Cornelis J P, Große-Wilde, Ewald, Gudobba, Cameron, Han, Yi, Hansson, Bill S, Hauser, Frank, Hughes, Daniel S T, Ioannidis, Panagiotis, Jacquin-Joly, Emmanuelle, Jennings, Emily C, Jones, Jeffery W, Klasberg, Steffen, Lee, Sandra L, Lesný, Peter, Lovegrove, Mackenzie, Martin, Sebastian, Martynov, Alexander G, Mayer, Christoph, Montagné, Nicolas, Moris, Victoria C, Munoz-Torres, Monica, Murali, Shwetha Canchi, Muzny, Donna M, Oppert, Brenda, Parisot, Nicolas, Pauli, Thomas, Peters, Ralph S, Petersen, Malte, Pick, Christian, Persyn, Emma, Podsiadlowski, Lars, Poelchau, Monica F, Provataris, Panagiotis, Qu, Jiaxin, Reijnders, Maarten J M F, von Reumont, Björn Marcus, Rosendale, Andrew J, Simao, Felipe A, Skelly, John, Sotiropoulos, Alexandros G, Stahl, Aaron L, Sumitani, Megumi, Szuter, Elise M, Tidswell, Olivia, Tsitlakidis, Evangelos, Vedder, Lucia, Waterhouse, Robert M, Werren, John H, Wilbrandt, Jeanne, Worley, Kim C, Yamamoto, Daisuke S, van de Zande, Louis, Zdobnov, Evgeny M, Ziesmann, Tanja, Gibbs, Richard A, Richards, Stephen, Hatakeyama, Masatsugu, Misof, Bernhard, Niehuis, Oliver
Publicado 2020