Bacillus subtilis encodes a discrete flap endonuclease that cleaves RNA-DNA hybrids

por Lowder, Frances Caroline, Simmons, Lyle A.
Publicado 2023

Complete Genome Sequence of Bacillus subtilis Strain PY79

por Schroeder, Jeremy W., Simmons, Lyle A.
Publicado 2013

The roles of replication-transcription conflict in mutagenesis and evolution of genome organization

por Schroeder, Jeremy W., Sankar, T. Sabari, Wang, Jue D., Simmons, Lyle A.
Publicado 2020

Structure and kinase activity of bacterial cell cycle regulator CcrZ

por Wozniak, Katherine J., Burby, Peter E., Nandakumar, Jayakrishnan, Simmons, Lyle A.
Publicado 2022

Complete Genome Sequence of Undomesticated Bacillus subtilis Strain NCIB 3610

por Nye, Taylor M., Schroeder, Jeremy W., Kearns, Daniel B., Simmons, Lyle A.
Publicado 2017

Discovery of a dual protease mechanism that promotes DNA damage checkpoint recovery

por Burby, Peter E., Simmons, Zackary W., Schroeder, Jeremy W., Simmons, Lyle A.
Publicado 2018

Mutant DnaAs of Escherichia coli that are refractory to negative control

por Chodavarapu, Sundari, Felczak, Magdalena M., Simmons, Lyle A., Murillo, Alec, Kaguni, Jon M.
Publicado 2013

Imaging Mismatch Repair and Cellular Responses to DNA Damage in Bacillus subtilis

por Klocko, Andrew D., Crafton, Kaleena M., Walsh, Brian W., Lenhart, Justin S., Simmons, Lyle A.
Publicado 2010

Mutagenic cost of ribonucleotides in bacterial DNA

por Schroeder, Jeremy W., Randall, Justin R., Hirst, William G., O’Donnell, Michael E., Simmons, Lyle A.
Publicado 2017

Protein Interactions in Genome Maintenance as Novel Antibacterial Targets

por Marceau, Aimee H., Bernstein, Douglas A., Walsh, Brian W., Shapiro, Walker, Simmons, Lyle A., Keck, James L.
Publicado 2013

Targeting the Type II Secretion System: Development, Optimization, and Validation of a High-Throughput Screen for the Identification of Small Molecule Inhibitors

por Waack, Ursula, Johnson, Tanya L., Chedid, Khalil, Xi, Chuanwu, Simmons, Lyle A., Mobley, Harry L. T., Sandkvist, Maria
Publicado 2017

DNA Damage and Reactive Nitrogen Species are Barriers to Vibrio cholerae Colonization of the Infant Mouse Intestine

por Davies, Bryan W., Bogard, Ryan W., Dupes, Nicole M., Gerstenfeld, Tyler A. I., Simmons, Lyle A., Mekalanos, John J.
Publicado 2011

The sliding clamp tethers the endonuclease domain of MutL to DNA

por Pillon, Monica C., Babu, Vignesh M. P., Randall, Justin R., Cai, Jiudou, Simmons, Lyle A., Sutton, Mark D., Guarné, Alba
Publicado 2015

DNA methylation from a Type I restriction modification system influences gene expression and virulence in Streptococcus pyogenes

por Nye, Taylor M., Jacob, Kristin M., Holley, Elena K., Nevarez, Juan M., Dawid, Suzanne, Simmons, Lyle A., Watson, Michael E.
Publicado 2019

DNA Methylation and RNA-DNA Hybrids Regulate the Single-Molecule Localization of a DNA Methyltransferase on the Bacterial Nucleoid

por Fernandez, Nicolas L., Chen, Ziyuan, Fuller, David E. H., van Gijtenbeek, Lieke A., Nye, Taylor M., Biteen, Julie S., Simmons, Lyle A.
Publicado 2023

Methyltransferase DnmA is responsible for genome-wide N6-methyladenosine modifications at non-palindromic recognition sites in Bacillus subtilis

por Nye, Taylor M, van Gijtenbeek, Lieke A, Stevens, Amanda G, Schroeder, Jeremy W, Randall, Justin R, Matthews, Lindsay A, Simmons, Lyle A
Publicado 2020

RNase H genes cause distinct impacts on RNA:DNA hybrid formation and mutagenesis genome-wide

por Schroeder, Jeremy W., Hurto, Rebecca L., Randall, Justin R., Wozniak, Katherine J., Timko, Taylor A., Nye, Taylor M., Wang, Jue D., Freddolino, Peter L., Simmons, Lyle A.
Publicado 2023

RNase H genes cause distinct impacts on RNA:DNA hybrid formation and mutagenesis genome wide

por Schroeder, Jeremy W., Hurto, Rebecca L., Randall, Justin R., Wozniak, Katherine J., Timko, Taylor A., Nye, Taylor M., Wang, Jue D., Freddolino, Peter L., Simmons, Lyle A.
Publicado 2023

Binding of the regulatory domain of MutL to the sliding β-clamp is species specific

por Almawi, Ahmad W, Scotland, Michelle K, Randall, Justin R, Liu, Linda, Martin, Heather K, Sacre, Lauralicia, Shen, Yao, Pillon, Monica C, Simmons, Lyle A, Sutton, Mark D, Guarné, Alba
Publicado 2019