Adaptations to High Salt in a Halophilic Protist: Differential Expression and Gene Acquisitions through Duplications and Gene Transfers

por Harding, Tommy, Roger, Andrew J., Simpson, Alastair G. B.
Publicado 2017

Osmoadaptative Strategy and Its Molecular Signature in Obligately Halophilic Heterotrophic Protists

por Harding, Tommy, Brown, Matthew W., Simpson, Alastair G.B., Roger, Andrew J.
Publicado 2016

How Many Species Are There on Earth and in the Ocean?

por Mora, Camilo, Tittensor, Derek P., Adl, Sina, Simpson, Alastair G. B., Worm, Boris
Publicado 2011

Mitochondrial Genome Evolution and a Novel RNA Editing System in Deep-Branching Heteroloboseids

por Yang, Jiwon, Harding, Tommy, Kamikawa, Ryoma, Simpson, Alastair G.B., Roger, Andrew J.
Publicado 2017

Combined morphological and phylogenomic re-examination of malawimonads, a critical taxon for inferring the evolutionary history of eukaryotes

por Heiss, Aaron A., Kolisko, Martin, Ekelund, Fleming, Brown, Matthew W., Roger, Andrew J., Simpson, Alastair G. B.
Publicado 2018

Evolutionary History of Mitochondrial Genomes in Discoba, Including the Extreme Halophile Pleurostomum flabellatum (Heterolobosea)

por Ettahi, Khaoula, Lhee, Duckhyun, Sung, Ji Yeon, Simpson, Alastair G B, Park, Jong Soo, Yoon, Hwan Su
Publicado 2020

Ecological and evolutionary patterns in the enigmatic protist genus Percolomonas (Heterolobosea; Discoba) from diverse habitats

por Tikhonenkov, Denis V., Jhin, Soo Hwan, Eglit, Yana, Miller, Kai, Plotnikov, Andrey, Simpson, Alastair G. B., Park, Jong Soo
Publicado 2019

A single-cell genome reveals diplonemid-like ancestry of kinetoplastid mitochondrial gene structure

por Wideman, Jeremy G., Lax, Gordon, Leonard, Guy, Milner, David S., Rodríguez-Martínez, Raquel, Simpson, Alastair G. B., Richards, Thomas A.
Publicado 2019

On the reversibility of parasitism: adaptation to a free-living lifestyle via gene acquisitions in the diplomonad Trepomonas sp. PC1

por Xu, Feifei, Jerlström-Hultqvist, Jon, Kolisko, Martin, Simpson, Alastair G. B., Roger, Andrew J., Svärd, Staffan G., Andersson, Jan O.
Publicado 2016

Erratum to: On the reversibility of parasitism: adaptation to a free-living lifestyle via gene acquisitions in the diplomonad Trepomonas sp. PC1

por Xu, Feifei, Jerlström-Hultqvist, Jon, Kolisko, Martin, Simpson, Alastair G. B., Roger, Andrew J., Svärd, Staffan G., Andersson, Jan O.
Publicado 2016

Barthelonids represent a deep-branching metamonad clade with mitochondrion-related organelles predicted to generate no ATP

por Yazaki, Euki, Kume, Keitaro, Shiratori, Takashi, Eglit, Yana, Tanifuji, Goro, Harada, Ryo, Simpson, Alastair G. B., Ishida, Ken-ichiro, Hashimoto, Tetsuo, Inagaki, Yuji
Publicado 2020

Arginine deiminase pathway enzymes: evolutionary history in metamonads and other eukaryotes

por Novák, Lukáš, Zubáčová, Zuzana, Karnkowska, Anna, Kolisko, Martin, Hroudová, Miluše, Stairs, Courtney W., Simpson, Alastair G. B., Keeling, Patrick J., Roger, Andrew J., Čepička, Ivan, Hampl, Vladimír
Publicado 2016

Phylogenomics Places Orphan Protistan Lineages in a Novel Eukaryotic Super-Group

por Brown, Matthew W, Heiss, Aaron A, Kamikawa, Ryoma, Inagaki, Yuji, Yabuki, Akinori, Tice, Alexander K, Shiratori, Takashi, Ishida, Ken-Ichiro, Hashimoto, Tetsuo, Simpson, Alastair G B, Roger, Andrew J
Publicado 2018

EukRef-excavates: seven curated SSU ribosomal RNA gene databases

por Kolisko, Martin, Flegontova, Olga, Karnkowska, Anna, Lax, Gordon, Maritz, Julia M, Pánek, Tomáš, Táborský, Petr, Carlton, Jane M, Čepička, Ivan, Horák, Aleš, Lukeš, Julius, Simpson, Alastair G B, Tai, Vera
Publicado 2020

Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes

por Leger, Michelle M., Kolisko, Martin, Kamikawa, Ryoma, Stairs, Courtney W., Kume, Keitaro, Čepička, Ivan, Silberman, Jeffrey D., Andersson, Jan O., Xu, Feifei, Yabuki, Akinori, Eme, Laura, Zhang, Qianqian, Takishita, Kiyotaka, Inagaki, Yuji, Simpson, Alastair G. B., Hashimoto, Tetsuo, Roger, Andrew J.
Publicado 2017

Genomic analysis finds no evidence of canonical eukaryotic DNA processing complexes in a free-living protist

por Salas-Leiva, Dayana E., Tromer, Eelco C., Curtis, Bruce A., Jerlström-Hultqvist, Jon, Kolisko, Martin, Yi, Zhenzhen, Salas-Leiva, Joan S., Gallot-Lavallée, Lucie, Williams, Shelby K., Kops, Geert J. P. L., Archibald, John M., Simpson, Alastair G. B., Roger, Andrew J.
Publicado 2021

Author Correction: Genomic analysis finds no evidence of canonical eukaryotic DNA processing complexes in a free-living protist

por Salas-Leiva, Dayana E., Tromer, Eelco C., Curtis, Bruce A., Jerlström-Hultqvist, Jon, Kolisko, Martin, Yi, Zhenzhen, Salas-Leiva, Joan S., Gallot-Lavallée, Lucie, Williams, Shelby K., Kops, Geert J. P. L., Archibald, John M., Simpson, Alastair G. B., Roger, Andrew J.
Publicado 2021

UniEuk: Time to Speak a Common Language in Protistology!

por Berney, Cédric, Ciuprina, Andreea, Bender, Sara, Brodie, Juliet, Edgcomb, Virginia, Kim, Eunsoo, Rajan, Jeena, Parfrey, Laura Wegener, Adl, Sina, Audic, Stéphane, Bass, David, Caron, David A., Cochrane, Guy, Czech, Lucas, Dunthorn, Micah, Geisen, Stefan, Glöckner, Frank Oliver, Mahé, Frédéric, Quast, Christian, Kaye, Jonathan Z., Simpson, Alastair G. B., Stamatakis, Alexandros, del Campo, Javier, Yilmaz, Pelin, de Vargas, Colomban
Publicado 2017

Euglena International Network (EIN): Driving euglenoid biotechnology for the benefit of a challenged world

por Ebenezer, ThankGod Echezona, Low, Ross S., O'Neill, Ellis Charles, Huang, Ishuo, DeSimone, Antonio, Farrow, Scott C., Field, Robert A., Ginger, Michael L., Guerrero, Sergio Adrián, Hammond, Michael, Hampl, Vladimír, Horst, Geoff, Ishikawa, Takahiro, Karnkowska, Anna, Linton, Eric W., Myler, Peter, Nakazawa, Masami, Cardol, Pierre, Sánchez-Thomas, Rosina, Saville, Barry J., Shah, Mahfuzur R., Simpson, Alastair G. B., Sur, Aakash, Suzuki, Kengo, Tyler, Kevin M., Zimba, Paul V., Hall, Neil, Field, Mark C.
Publicado 2022

CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms

por Pawlowski, Jan, Audic, Stéphane, Adl, Sina, Bass, David, Belbahri, Lassaâd, Berney, Cédric, Bowser, Samuel S., Cepicka, Ivan, Decelle, Johan, Dunthorn, Micah, Fiore-Donno, Anna Maria, Gile, Gillian H., Holzmann, Maria, Jahn, Regine, Jirků, Miloslav, Keeling, Patrick J., Kostka, Martin, Kudryavtsev, Alexander, Lara, Enrique, Lukeš, Julius, Mann, David G., Mitchell, Edward A. D., Nitsche, Frank, Romeralo, Maria, Saunders, Gary W., Simpson, Alastair G. B., Smirnov, Alexey V., Spouge, John L., Stern, Rowena F., Stoeck, Thorsten, Zimmermann, Jonas, Schindel, David, de Vargas, Colomban
Publicado 2012