Advances in genomic hepatocellular carcinoma research

por Huang, Weitai, Skanderup, Anders Jacobsen, Lee, Caroline G
Publicado 2018

MutSpot: detection of non-coding mutation hotspots in cancer genomes

por Guo, Yu Amanda, Chang, Mei Mei, Skanderup, Anders Jacobsen
Publicado 2020

PUREE: accurate pan-cancer tumor purity estimation from gene expression data

por Revkov, Egor, Kulshrestha, Tanmay, Sung, Ken Wing-Kin, Skanderup, Anders Jacobsen
Publicado 2023

SMuRF: portable and accurate ensemble prediction of somatic mutations

por Huang, Weitai, Guo, Yu Amanda, Muthukumar, Karthik, Baruah, Probhonjon, Chang, Mei Mei, Jacobsen Skanderup, Anders
Publicado 2019

Mutation hotspots at CTCF binding sites coupled to chromosomal instability in gastrointestinal cancers

por Guo, Yu Amanda, Chang, Mei Mei, Huang, Weitai, Ooi, Wen Fong, Xing, Manjie, Tan, Patrick, Skanderup, Anders Jacobsen
Publicado 2018

Accurate somatic variant detection using weakly supervised deep learning

por Krishnamachari, Kiran, Lu, Dylan, Swift-Scott, Alexander, Yeraliyev, Anuar, Lee, Kayla, Huang, Weitai, Leng, Sim Ngak, Skanderup, Anders Jacobsen
Publicado 2022

Cancer-associated mutations in DICER1 RNase IIIa and IIIb domains exert similar effects on miRNA biogenesis

por Vedanayagam, Jeffrey, Chatila, Walid K., Aksoy, Bülent Arman, Majumdar, Sonali, Skanderup, Anders Jacobsen, Demir, Emek, Schultz, Nikolaus, Sander, Chris, Lai, Eric C.
Publicado 2019

Genomic differences between black and white patients implicate a distinct immune response to papillary renal cell carcinoma

por Paulucci, David J., Sfakianos, John P., Skanderup, Anders J., Kan, Kathleen, Tsao, Che-Kai, Galsky, Matthew D., Hakimi, A. Ari, Badani, Ketan K.
Publicado 2016

The long non-coding RNA MIR31HG regulates the senescence associated secretory phenotype

por Montes, Marta, Lubas, Michal, Arendrup, Frederic S., Mentz, Bettina, Rohatgi, Neha, Tumas, Sarunas, Harder, Lea M., Skanderup, Anders J., Andersen, Jens S., Lund, Anders H.
Publicado 2021

Heat selection enables highly scalable methylome profiling in cell-free DNA for noninvasive monitoring of cancer patients

por Cheruba, Elsie, Viswanathan, Ramya, Wong, Pui-Mun, Womersley, Howard John, Han, Shuting, Tay, Brenda, Lau, Yiting, Gan, Anna, Poon, Polly S. Y., Skanderup, Anders, Ng, Sarah B., Chok, Aik Yong, Chong, Dawn Qingqing, Tan, Iain Beehuat, Cheow, Lih Feng
Publicado 2022

Obtaining spatially resolved tumor purity maps using deep multiple instance learning in a pan-cancer study

por Oner, Mustafa Umit, Chen, Jianbin, Revkov, Egor, James, Anne, Heng, Seow Ye, Kaya, Arife Neslihan, Alvarez, Jacob Josiah Santiago, Takano, Angela, Cheng, Xin Min, Lim, Tony Kiat Hon, Tan, Daniel Shao Weng, Zhai, Weiwei, Skanderup, Anders Jacobsen, Sung, Wing-Kin, Lee, Hwee Kuan
Publicado 2021

Landscape of germline pathogenic variants in patients with dual primary breast and lung cancer

por Lee, Ning-Yuan, Hum, Melissa, Zihara, Sabna, Wang, Lanying, Myint, Matthew K., Lim, Darren Wan-Teck, Toh, Chee-Keong, Skanderup, Anders, Samol, Jens, Tan, Min-Han, Ang, Peter, Lee, Soo-Chin, Tan, Eng-Huat, Lai, Gillianne G. Y., Tan, Daniel S. W., Yap, Yoon-Sim, Lee, Ann S. G.
Publicado 2023

Correction: Landscape of germline pathogenic variants in patients with dual primary breast and lung cancer

por Lee, Ning-Yuan, Hum, Melissa, Zihara, Sabna, Wang, Lanying, Myint, Matthew K., Lim, Darren Wan-Teck, Toh, Chee-Keong, Skanderup, Anders, Samol, Jens, Tan, Min-Han, Ang, Peter, Lee, Soo-Chin, Tan, Eng-Huat, Lai, Gillianne G. Y., Tan, Daniel S. W., Yap, Yoon-Sim, Lee, Ann S. G.
Publicado 2023

A chemical genetic screen identifies Aurora kinases as a therapeutic target in EGFR T790M negative, gefitinib-resistant head and neck squamous cell carcinoma (HNSCC)

por Low, Joo-Leng, Lau, Dawn Pingxi, Zhang, Xiaoqian, Kwang, Xue-Lin, Rohatgi, Neha, Chan, Jane Vin, Chong, Fui-Teen, Wong, Stephen Qi Rong, Leong, Hui-Sun, Thangavelu, Matan Thangavelu, Rikka, Shivaji, Skanderup, Anders Martin Jacobsen, Tan, Daniel Shao Weng, Periyasamy, Giridharan, Koh, Judice Lie Yong, Iyer, N Gopalakrishna, DasGupta, Ramanuj
Publicado 2021

Tissue-specific cell-free DNA degradation quantifies circulating tumor DNA burden

por Zhu, Guanhua, Guo, Yu A., Ho, Danliang, Poon, Polly, Poh, Zhong Wee, Wong, Pui Mun, Gan, Anna, Chang, Mei Mei, Kleftogiannis, Dimitrios, Lau, Yi Ting, Tay, Brenda, Lim, Wan Jun, Chua, Clarinda, Tan, Tira J., Koo, Si-Lin, Chong, Dawn Q., Yap, Yoon Sim, Tan, Iain, Ng, Sarah, Skanderup, Anders J.
Publicado 2021

Corrigendum to ‘A chemical genetic screen identifies Aurora kinases as a therapeutic target in EGFR T790M negative, gefitinib-resistant head and neck squamous cell carcinoma (HNSCC...

por Low, Joo-Leng, Lau, Dawn Pingxi, Zhang, Xiaoqian, Kwang, Xue-Lin, Rohatgi, Neha, Chan, Jane Vin, Chong, Fui-Teen, Wong, Stephen Qi Rong, Leong, Hui-Sun, Thangavelu, Matan Thangavelu, Rikka, Shivaji, Skanderup, Anders Martin Jacobsen, Tan, Daniel Shao Weng, Periyasamy, Giridharan, Koh, Judice Lie Yong, Iyer, N Gopalakrishna, DasGupta, Ramanuj
Publicado 2021

Association of Clinicopathologic and Molecular Tumor Features With Recurrence in Resected Early-Stage Epidermal Growth Factor Receptor–Positive Non–Small Cell Lung Cancer

por Saw, Stephanie P. L., Zhou, Siqin, Chen, Jianbin, Lai, Gillianne, Ang, Mei-Kim, Chua, Kevin, Kanesvaran, Ravindran, Ng, Quan Sing, Jain, Amit, Tan, Wan Ling, Rajasekaran, Tanujaa, Lim, Darren W. T., Tan, Aaron, Fong, Kam Weng, Takano, Angela, Cheng, Xin Ming, Lim, Kiat Hon, Koh, Tina, Ong, Boon-Hean, Tan, Eng Huat, Toh, Chee Keong, Skanderup, Anders J., Tan, Sze Huey, Tan, Daniel S. W.
Publicado 2021

Molecular analysis of aggressive renal cell carcinoma with unclassified histology reveals distinct subsets

por Chen, Ying-Bei, Xu, Jianing, Skanderup, Anders Jacobsen, Dong, Yiyu, Brannon, A. Rose, Wang, Lu, Won, Helen H., Wang, Patricia I., Nanjangud, Gouri J., Jungbluth, Achim A., Li, Wei, Ojeda, Virginia, Hakimi, A. Ari, Voss, Martin H., Schultz, Nikolaus, Motzer, Robert J., Russo, Paul, Cheng, Emily H., Giancotti, Filippo G., Lee, William, Berger, Michael F., Tickoo, Satish K., Reuter, Victor E., Hsieh, James J.
Publicado 2016

Integrative epigenomic and high-throughput functional enhancer profiling reveals determinants of enhancer heterogeneity in gastric cancer

por Sheng, Taotao, Ho, Shamaine Wei Ting, Ooi, Wen Fong, Xu, Chang, Xing, Manjie, Padmanabhan, Nisha, Huang, Kie Kyon, Ma, Lijia, Ray, Mohana, Guo, Yu Amanda, Sim, Ngak Leng, Anene-Nzelu, Chukwuemeka George, Chang, Mei Mei, Razavi-Mohseni, Milad, Beer, Michael A., Foo, Roger Sik Yin, Sundar, Raghav, Chan, Yiong Huak, Tan, Angie Lay Keng, Ong, Xuewen, Skanderup, Anders Jacobsen, White, Kevin P., Jha, Sudhakar, Tan, Patrick
Publicado 2021

Deficiency of the splicing factor RBM10 limits EGFR inhibitor response in EGFR-mutant lung cancer

por Nanjo, Shigeki, Wu, Wei, Karachaliou, Niki, Blakely, Collin M., Suzuki, Junji, Chou, Yu-Ting, Ali, Siraj M., Kerr, D. Lucas, Olivas, Victor R., Shue, Jonathan, Rotow, Julia, Mayekar, Manasi K., Haderk, Franziska, Chatterjee, Nilanjana, Urisman, Anatoly, Yeo, Jia Chi, Skanderup, Anders J., Tan, Aaron C., Tam, Wai Leong, Arrieta, Oscar, Hosomichi, Kazuyoshi, Nishiyama, Akihiro, Yano, Seiji, Kirichok, Yuriy, Tan, Daniel S.W., Rosell, Rafael, Okimoto, Ross A, Bivona, Trever G.
Publicado 2022