The Candida Genome Database (CGD): incorporation of Assembly 22, systematic identifiers and visualization of high throughput sequencing data

por Skrzypek, Marek S., Binkley, Jonathan, Binkley, Gail, Miyasato, Stuart R., Simison, Matt, Sherlock, Gavin
Publicado 2017

The Candida Genome Database (CGD), a community resource for Candida albicans gene and protein information

por Arnaud, Martha B., Costanzo, Maria C., Skrzypek, Marek S., Binkley, Gail, Lane, Christopher, Miyasato, Stuart R., Sherlock, Gavin
Publicado 2005

Sequence resources at the Candida Genome Database

por Arnaud, Martha B., Costanzo, Maria C., Skrzypek, Marek S., Shah, Prachi, Binkley, Gail, Lane, Christopher, Miyasato, Stuart R., Sherlock, Gavin
Publicado 2007

New tools at the Candida Genome Database: biochemical pathways and full-text literature search

por Skrzypek, Marek S., Arnaud, Martha B., Costanzo, Maria C., Inglis, Diane O., Shah, Prachi, Binkley, Gail, Miyasato, Stuart R., Sherlock, Gavin
Publicado 2010

Saccharomyces genome database update: server architecture, pan-genome nomenclature, and external resources

por Wong, Edith D, Miyasato, Stuart R, Aleksander, Suzi, Karra, Kalpana, Nash, Robert S, Skrzypek, Marek S, Weng, Shuai, Engel, Stacia R, Cherry, J Michael
Publicado 2023

New mutant phenotype data curation system in the Saccharomyces Genome Database

por Costanzo, Maria C., Skrzypek, Marek S., Nash, Robert, Wong, Edith, Binkley, Gail, Engel, Stacia R., Hitz, Benjamin, Hong, Eurie L., Cherry, J. Michael
Publicado 2009

Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae

por Inglis, Diane O, Binkley, Jonathan, Skrzypek, Marek S, Arnaud, Martha B, Cerqueira, Gustavo C, Shah, Prachi, Wymore, Farrell, Wortman, Jennifer R, Sherlock, Gavin
Publicado 2013

The Candida genome database incorporates multiple Candida species: multispecies search and analysis tools with curated gene and protein information for Candida albicans and Candida...

por Inglis, Diane O., Arnaud, Martha B., Binkley, Jonathan, Shah, Prachi, Skrzypek, Marek S., Wymore, Farrell, Binkley, Gail, Miyasato, Stuart R., Simison, Matt, Sherlock, Gavin
Publicado 2012

The Candida Genome Database: The new homology information page highlights protein similarity and phylogeny

por Binkley, Jonathan, Arnaud, Martha B., Inglis, Diane O., Skrzypek, Marek S., Shah, Prachi, Wymore, Farrell, Binkley, Gail, Miyasato, Stuart R., Simison, Matt, Sherlock, Gavin
Publicado 2014

Updated regulation curation model at the Saccharomyces Genome Database

por Engel, Stacia R, Skrzypek, Marek S, Hellerstedt, Sage T, Wong, Edith D, Nash, Robert S, Weng, Shuai, Binkley, Gail, Sheppard, Travis K, Karra, Kalpana, Cherry, J Michael
Publicado 2018

Integration of macromolecular complex data into the Saccharomyces Genome Database

por Wong, Edith D, Skrzypek, Marek S, Weng, Shuai, Binkley, Gail, Meldal, Birgit H M, Perfetto, Livia, Orchard, Sandra E, Engel, Stacia R, Cherry, J Michael
Publicado 2019

Outreach and online training services at the Saccharomyces Genome Database

por MacPherson, Kevin A., Starr, Barry, Wong, Edith D., Dalusag, Kyla S., Hellerstedt, Sage T., Lang, Olivia W., Nash, Robert S., Skrzypek, Marek S., Engel, Stacia R., Cherry, J. Michael
Publicado 2017

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

por Engel, Stacia R, Wong, Edith D, Nash, Robert S, Aleksander, Suzi, Alexander, Micheal, Douglass, Eric, Karra, Kalpana, Miyasato, Stuart R, Simison, Matt, Skrzypek, Marek S, Weng, Shuai, Cherry, J Michael
Publicado 2021

Curation accuracy of model organism databases

por Keseler, Ingrid M., Skrzypek, Marek, Weerasinghe, Deepika, Chen, Albert Y., Fulcher, Carol, Li, Gene-Wei, Lemmer, Kimberly C., Mladinich, Katherine M., Chow, Edmond D., Sherlock, Gavin, Karp, Peter D.
Publicado 2014

The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations

por Cerqueira, Gustavo C., Arnaud, Martha B., Inglis, Diane O., Skrzypek, Marek S., Binkley, Gail, Simison, Matt, Miyasato, Stuart R., Binkley, Jonathan, Orvis, Joshua, Shah, Prachi, Wymore, Farrell, Sherlock, Gavin, Wortman, Jennifer R.
Publicado 2014

The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community

por Arnaud, Martha B., Chibucos, Marcus C., Costanzo, Maria C., Crabtree, Jonathan, Inglis, Diane O., Lotia, Adil, Orvis, Joshua, Shah, Prachi, Skrzypek, Marek S., Binkley, Gail, Miyasato, Stuart R., Wortman, Jennifer R., Sherlock, Gavin
Publicado 2010

Saccharomyces genome database informs human biology

por Skrzypek, Marek S, Nash, Robert S, Wong, Edith D, MacPherson, Kevin A, Hellerstedt, Sage T, Engel, Stacia R, Karra, Kalpana, Weng, Shuai, Sheppard, Travis K, Binkley, Gail, Simison, Matt, Miyasato, Stuart R, Cherry, J Michael
Publicado 2018

Toward an interactive article: integrating journals and biological databases

por Rangarajan, Arun, Schedl, Tim, Yook, Karen, Chan, Juancarlos, Haenel, Stephen, Otis, Lolly, Faelten, Sharon, DePellegrin-Connelly, Tracey, Isaacson, Ruth, Skrzypek, Marek S, Marygold, Steven J, Stefancsik , Raymund, Cherry, J Michael, Sternberg, Paul W, Müller, Hans-Michael
Publicado 2011

Integration of new alternative reference strain genome sequences into the Saccharomyces genome database

por Song, Giltae, Balakrishnan, Rama, Binkley, Gail, Costanzo, Maria C., Dalusag, Kyla, Demeter, Janos, Engel, Stacia, Hellerstedt, Sage T., Karra, Kalpana, Hitz, Benjamin C., Nash, Robert S., Paskov, Kelley, Sheppard, Travis, Skrzypek, Marek, Weng, Shuai, Wong, Edith, Michael Cherry, J.
Publicado 2016

The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources

por Arnaud, Martha B., Cerqueira, Gustavo C., Inglis, Diane O., Skrzypek, Marek S., Binkley, Jonathan, Chibucos, Marcus C., Crabtree, Jonathan, Howarth, Clinton, Orvis, Joshua, Shah, Prachi, Wymore, Farrell, Binkley, Gail, Miyasato, Stuart R., Simison, Matt, Sherlock, Gavin, Wortman, Jennifer R.
Publicado 2012