Designed Surface Residue Substitutions in [NiFe] Hydrogenase that Improve Electron Transfer Characteristics

por Yonemoto, Isaac T., Smith, Hamilton O., Weyman, Philip D.
Publicado 2015

A broad survey reveals substitution tolerance of residues ligating FeS clusters in [NiFe] hydrogenase

por Yonemoto, Isaac T, Clarkson, Benjamin R, Smith, Hamilton O, Weyman, Philip D
Publicado 2014

A systems biology tour de force for a near-minimal bacterium

por Glass, John I, Hutchison III, Clyde A, Smith, Hamilton O, Venter, J Craig
Publicado 2009

Dual organism design cycle reveals small subunit substitutions that improve [NiFe] hydrogenase hydrogen evolution

por Yonemoto, Isaac T, Matteri, Christopher W, Nguyen, Thao Amy, Smith, Hamilton O, Weyman, Philip D
Publicado 2013

Heterologous Expression of Alteromonas macleodii and Thiocapsa roseopersicina [NiFe] Hydrogenases in Synechococcus elongatus

por Weyman, Philip D., Vargas, Walter A., Tong, Yingkai, Yu, Jianping, Maness, Pin-Ching, Smith, Hamilton O., Xu, Qing
Publicado 2011

Polar Effects of Transposon Insertion into a Minimal Bacterial Genome

por Hutchison, Clyde A., Merryman, Chuck, Sun, Lijie, Assad-Garcia, Nacyra, Richter, R. Alexander, Smith, Hamilton O., Glass, John I.
Publicado 2019

Rescue of mutant fitness defects using in vitro reconstituted designer transposons in Mycoplasma mycoides

por Karas, Bogumil J., Wise, Kim S., Sun, Lijie, Venter, J. Craig, Glass, John I., Hutchison, Clyde A., Smith, Hamilton O., Suzuki, Yo
Publicado 2014

Where Next for Microbiome Research?

por Waldor, Matthew K., Tyson, Gene, Borenstein, Elhanan, Ochman, Howard, Moeller, Andrew, Finlay, B. Brett, Kong, Heidi H., Gordon, Jeffrey I., Nelson, Karen E., Dabbagh, Karim, Smith, Hamilton
Publicado 2015

Kinetic Modeling of the Genetic Information Processes in a Minimal Cell

por Thornburg, Zane R., Melo, Marcelo C. R., Bianchi, David, Brier, Troy A., Crotty, Cole, Breuer, Marian, Smith, Hamilton O., Hutchison, Clyde A., Glass, John I., Luthey-Schulten, Zaida
Publicado 2019

Gross Chromosomal Rearrangements in Kluyveromyces marxianus Revealed by Illumina and Oxford Nanopore Sequencing

por Ding, Lin, Macdonald, Harrison D., Smith, Hamilton O., Hutchison, Clyde A., Merryman, Chuck, Michael, Todd P., Abramson, Bradley W., Kannan, Krishna, Liang, Joe, Gill, John, Gibson, Daniel G., Glass, John I.
Publicado 2020

One step engineering of the small-subunit ribosomal RNA using CRISPR/Cas9

por Kannan, Krishna, Tsvetanova, Billyana, Chuang, Ray-Yuan, Noskov, Vladimir N., Assad-Garcia, Nacyra, Ma, Li, Hutchison III, Clyde A., Smith, Hamilton O., Glass, John I., Merryman, Chuck, Venter, J. Craig, Gibson, Daniel G.
Publicado 2016

Fundamental behaviors emerge from simulations of a living minimal cell

por Thornburg, Zane R., Bianchi, David M., Brier, Troy A., Gilbert, Benjamin R., Earnest, Tyler M., Melo, Marcelo C.R., Safronova, Nataliya, Sáenz, James P., Cook, András T., Wise, Kim S., Hutchison, Clyde A., Smith, Hamilton O., Glass, John I., Luthey-Schulten, Zaida
Publicado 2022

Essential metabolism for a minimal cell

por Breuer, Marian, Earnest, Tyler M, Merryman, Chuck, Wise, Kim S, Sun, Lijie, Lynott, Michaela R, Hutchison, Clyde A, Smith, Hamilton O, Lapek, John D, Gonzalez, David J, de Crécy-Lagard, Valérie, Haas, Drago, Hanson, Andrew D, Labhsetwar, Piyush, Glass, John I, Luthey-Schulten, Zaida
Publicado 2019

Assembly of eukaryotic algal chromosomes in yeast

por Karas, Bogumil J, Molparia, Bhuvan, Jablanovic, Jelena, Hermann, Wolfgang J, Lin, Ying-Chi, Dupont, Christopher L, Tagwerker, Christian, Yonemoto, Isaac T, Noskov, Vladimir N, Chuang, Ray-Yuan, Allen, Andrew E, Glass, John I, Hutchison, Clyde A, Smith, Hamilton O, Venter, J Craig, Weyman, Philip D
Publicado 2013

Cloning whole bacterial genomes in yeast

por Benders, Gwynedd A., Noskov, Vladimir N., Denisova, Evgeniya A., Lartigue, Carole, Gibson, Daniel G., Assad-Garcia, Nacyra, Chuang, Ray-Yuan, Carrera, William, Moodie, Monzia, Algire, Mikkel A., Phan, Quang, Alperovich, Nina, Vashee, Sanjay, Merryman, Chuck, Venter, J. Craig, Smith, Hamilton O., Glass, John I., Hutchison, Clyde A.
Publicado 2010

Sequence analysis of a complete 1.66 Mb Prochlorococcus marinus MED4 genome cloned in yeast

por Tagwerker, Christian, Dupont, Christopher L., Karas, Bogumil J., Ma, Li, Chuang, Ray-Yuan, Benders, Gwynedd A., Ramon, Adi, Novotny, Mark, Montague, Michael G., Venepally, Pratap, Brami, Daniel, Schwartz, Ariel, Andrews-Pfannkoch, Cynthia, Gibson, Daniel G., Glass, John I., Smith, Hamilton O., Venter, J. Craig, Hutchison, Clyde A.
Publicado 2012

Bacterial genome reduction using the progressive clustering of deletions via yeast sexual cycling

por Suzuki, Yo, Assad-Garcia, Nacyra, Kostylev, Maxim, Noskov, Vladimir N., Wise, Kim S., Karas, Bogumil J., Stam, Jason, Montague, Michael G., Hanly, Timothy J., Enriquez, Nico J., Ramon, Adi, Goldgof, Gregory M., Richter, R. Alexander, Vashee, Sanjay, Chuang, Ray-Yuan, Winzeler, Elizabeth A., Hutchison, Clyde A., Gibson, Daniel G., Smith, Hamilton O., Glass, John I., Venter, J. Craig
Publicado 2015

Designer diatom episomes delivered by bacterial conjugation

por Karas, Bogumil J., Diner, Rachel E., Lefebvre, Stephane C., McQuaid, Jeff, Phillips, Alex P.R., Noddings, Chari M., Brunson, John K., Valas, Ruben E., Deerinck, Thomas J., Jablanovic, Jelena, Gillard, Jeroen T.F., Beeri, Karen, Ellisman, Mark H., Glass, John I., Hutchison III, Clyde A., Smith, Hamilton O., Venter, J. Craig, Allen, Andrew E., Dupont, Christopher L., Weyman, Philip D.
Publicado 2015

DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae

por Heidelberg, John F., Eisen, Jonathan A., Nelson, William C., Clayton, Rebecca A., Gwinn, Michelle L., Dodson, Robert J., Haft, Daniel H., Hickey, Erin K., Peterson, Jeremy D., Umayam, Lowell, Gill, Steven R., Nelson, Karen E., Read, Timothy D., Tettelin, Hervé, Richardson, Delwood, Ermolaeva, Maria D., Vamathevan, Jessica, Bass, Steven, Qin, Haiying, Dragoi, Ioana, Sellers, Patrick, McDonald, Lisa, Utterback, Teresa, Fleishmann, Robert D., Nierman, William C., White, Owen, Salzberg, Steven L., Smith, Hamilton O., Colwell, Rita R., Mekalanos, John J., Venter, J. Craig, Fraser, Claire M.
Publicado 2000

The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific

por Rusch, Douglas B, Halpern, Aaron L, Sutton, Granger, Heidelberg, Karla B, Williamson, Shannon, Yooseph, Shibu, Wu, Dongying, Eisen, Jonathan A, Hoffman, Jeff M, Remington, Karin, Beeson, Karen, Tran, Bao, Smith, Hamilton, Baden-Tillson, Holly, Stewart, Clare, Thorpe, Joyce, Freeman, Jason, Andrews-Pfannkoch, Cynthia, Venter, Joseph E, Li, Kelvin, Kravitz, Saul, Heidelberg, John F, Utterback, Terry, Rogers, Yu-Hui, Falcón, Luisa I, Souza, Valeria, Bonilla-Rosso, Germán, Eguiarte, Luis E, Karl, David M, Sathyendranath, Shubha, Platt, Trevor, Bermingham, Eldredge, Gallardo, Victor, Tamayo-Castillo, Giselle, Ferrari, Michael R, Strausberg, Robert L, Nealson, Kenneth, Friedman, Robert, Frazier, Marvin, Venter, J. Craig
Publicado 2007