Unbiased profiling of CRISPR RNA-guided transposition products by long-read sequencing

por Vo, Phuc Leo H., Acree, Christopher, Smith, Melissa L., Sternberg, Samuel H.
Publicado 2021

Targeted long-read sequencing facilitates phased diploid assembly and genotyping of the human T cell receptor alpha, delta, and beta loci

por Rodriguez, Oscar L., Silver, Catherine A., Shields, Kaitlyn, Smith, Melissa L., Watson, Corey T.
Publicado 2022

Persistent SARS-CoV-2 Infection in a Multiple Sclerosis Patient on Ocrelizumab: A Case Report

por Ambadapoodi, Raghava S., Arnold, Forest W., Chariker, Julia H., Glynn, Alex, Lauer, William, Marimuthu, Subathra, Rouchka, Eric C., Smith, Melissa L., Wolf, Leslie A.
Publicado 2023

Long read, isoform aware sequencing of mouse nucleus accumbens after chronic cocaine treatment

por Estill, Molly, Ribeiro, Efrain, Francoeur, Nancy J., Smith, Melissa L., Sebra, Robert, Yeh, Szu-Ying, Cunningham, Ashley M., Nestler, Eric J., Shen, Li
Publicado 2021

Reference long-read isoform-aware transcriptomes of 4 human peripheral blood lymphocyte subsets

por Woolley, Cassandra R, Chariker, Julia H, Rouchka, Eric C, Ford, Easton E, Hudson, Elizabeth A, Waigel, Sabine J, Smith, Melissa L, Mitchell, Thomas C
Publicado 2022

2129. When Is Methicillin-resistant Staphylococcus aureus not Methicillin-resistant Staphylococcus aureus?

por Gitman, Melissa R, Obla, Ajay, Van de Guchte, Adriana, Sordillo, Emilia Mia, Polanco, Jose, Chung, Marilyn, Oussenko, Irina, Smith, Melissa L, Altman, Deena R, Van Bakel, Harm
Publicado 2019

Genetic variation in the immunoglobulin heavy chain locus shapes the human antibody repertoire

por Rodriguez, Oscar L., Safonova, Yana, Silver, Catherine A., Shields, Kaitlyn, Gibson, William S., Kos, Justin T., Tieri, David, Ke, Hanzhong, Jackson, Katherine J. L., Boyd, Scott D., Smith, Melissa L., Marasco, Wayne A., Watson, Corey T.
Publicado 2023

Coupling of Single Molecule, Long Read Sequencing with IMGT/HighV-QUEST Analysis Expedites Identification of SIV gp140-Specific Antibodies from scFv Phage Display Libraries

por Han, Seung Yub, Antoine, Alesia, Howard, David, Chang, Bryant, Chang, Woo Sung, Slein, Matthew, Deikus, Gintaras, Kossida, Sofia, Duroux, Patrice, Lefranc, Marie-Paule, Sebra, Robert P., Smith, Melissa L., Fofana, Ismael Ben F.
Publicado 2018

ORF Capture-Seq as a versatile method for targeted identification of full-length isoforms

por Sheynkman, Gloria M., Tuttle, Katharine S., Laval, Florent, Tseng, Elizabeth, Underwood, Jason G., Yu, Liang, Dong, Da, Smith, Melissa L., Sebra, Robert, Willems, Luc, Hao, Tong, Calderwood, Michael A., Hill, David E., Vidal, Marc
Publicado 2020

A Novel Framework for Characterizing Genomic Haplotype Diversity in the Human Immunoglobulin Heavy Chain Locus

por Rodriguez, Oscar L., Gibson, William S., Parks, Tom, Emery, Matthew, Powell, James, Strahl, Maya, Deikus, Gintaras, Auckland, Kathryn, Eichler, Evan E., Marasco, Wayne A., Sebra, Robert, Sharp, Andrew J., Smith, Melissa L., Bashir, Ali, Watson, Corey T.
Publicado 2020

Modified methicillin-resistant Staphylococcus aureus detected in neonatal intensive care patients

por Gitman, Melissa R, Alburquerque, Bremy, Chung, Marilyn, van de Guchte, Adriana, Sullivan, Mitchell J, Obla, Ajay, Polanco, Jose, Oussenko, Irina, Smith, Melissa L, Samaroo, Flora, Barackman, Debbie, Altman, Deena R, Sordillo, Emilia Mia, van Bakel, Harm
Publicado 2021

Reemergence of pathogenic, autoantibody-producing B cell clones in myasthenia gravis following B cell depletion therapy

por Fichtner, Miriam L., Hoehn, Kenneth B., Ford, Easton E., Mane-Damas, Marina, Oh, Sangwook, Waters, Patrick, Payne, Aimee S., Smith, Melissa L., Watson, Corey T., Losen, Mario, Martinez-Martinez, Pilar, Nowak, Richard J., Kleinstein, Steven H., O’Connor, Kevin C.
Publicado 2022

552. Within-Host Evaluation of Colonization During Active Methicillin-Resistant S. aureus Bacteremia

por Berbel Caban, Ana B, Dupper, Amy, Van de Guchte, Adriana, Obla, Ajay, Chung, Marilyn, Gottlieb, Lindsey B, Mills, Alexandra, Fox, Lindsey, Oussenko, Irina, Samaroo, Flora, Smith, Melissa L, Polanco, Jose, Patel, Gopi, Gitman, Melissa R, Sullivan, Mitchell, Van Bakel, Harm, Altman, Deena R
Publicado 2019

Staphylococcus aureus induces an itaconate-dominated immunometabolic response that drives biofilm formation

por Tomlinson, Kira L., Lung, Tania Wong Fok, Dach, Felix, Annavajhala, Medini K., Gabryszewski, Stanislaw J., Groves, Ryan A., Drikic, Marija, Francoeur, Nancy J., Sridhar, Shwetha H., Smith, Melissa L., Khanal, Sara, Britto, Clemente J., Sebra, Robert, Lewis, Ian, Uhlemann, Anne-Catrin, Kahl, Barbara C., Prince, Alice S., Riquelme, Sebastián A.
Publicado 2021

Everybody nose: molecular and clinical characteristics of nasal colonization during active methicillin-resistant Staphylococcus aureus bloodstream infection

por Reategui Schwarz, Erika, van de Guchte, Adriana, Dupper, Amy C., Caban, Ana Berbel, Nadkarni, Devika, Fox, Lindsey, Mills, Alexandra, Obla, Ajay, Chacko, Kieran I., Oussenko, Irina, Samaroo, Flora, Polanco, Jose, Silvera, Richard, Smith, Melissa L., Patel, Gopi, Gitman, Melissa, Alburquerque, Bremy, Chung, Marilyn, Sullivan, Mitchell J., van Bakel, Harm, Altman, Deena R.
Publicado 2022

Isoform-resolved transcriptome of the human preimplantation embryo

por Torre, Denis, Francoeur, Nancy J., Kalma, Yael, Gross Carmel, Ilana, Melo, Betsaida S., Deikus, Gintaras, Allette, Kimaada, Flohr, Ron, Fridrikh, Maya, Vlachos, Konstantinos, Madrid, Kent, Shah, Hardik, Wang, Ying-Chih, Sridhar, Shwetha H., Smith, Melissa L., Eliyahu, Efrat, Azem, Foad, Amir, Hadar, Mayshar, Yoav, Marazzi, Ivan, Guccione, Ernesto, Schadt, Eric, Ben-Yosef, Dalit, Sebra, Robert
Publicado 2023

HIV-Positive Liver Transplant Does not Alter the Latent Viral Reservoir in Recipients With Antiretroviral Therapy-Suppressed HIV

por Benner, Sarah E, Zhu, Xianming, Hussain, Sarah, Florman, Sander, Eby, Yolanda, Fernandez, Reinaldo E, Ostrander, Darin, Rana, Meenakshi, Ottmann, Shane, Hand, Jonathan, Price, Jennifer C, Pereira, Marcus R, Wojciechowski, David, Simkins, Jacques, Stosor, Valentina, Mehta, Sapna A, Aslam, Saima, Malinis, Maricar, Haidar, Ghady, Massie, Allan, Smith, Melissa L, Odim, Jonah, Morsheimer, Megan, Quinn, Thomas C, Laird, Gregory M, Siliciano, Robert, Balagopal, Ashwin, Segev, Dorry L, Durand, Christine M, Redd, Andrew D, Tobian, Aaron A R
Publicado 2023

Deep oncopanel sequencing reveals within block position-dependent quality degradation in FFPE processed samples

por Zhang, Yifan, Blomquist, Thomas M., Kusko, Rebecca, Stetson, Daniel, Zhang, Zhihong, Yin, Lihui, Sebra, Robert, Gong, Binsheng, Lococo, Jennifer S., Mittal, Vinay K., Novoradovskaya, Natalia, Yeo, Ji-Youn, Dominiak, Nicole, Hipp, Jennifer, Raymond, Amelia, Qiu, Fujun, Arib, Hanane, Smith, Melissa L., Brock, Jay E., Farkas, Daniel H., Craig, Daniel J., Crawford, Erin L., Li, Dan, Morrison, Tom, Tom, Nikola, Xiao, Wenzhong, Yang, Mary, Mason, Christopher E., Richmond, Todd A., Jones, Wendell, Johann, Donald J., Shi, Leming, Tong, Weida, Willey, James C., Xu, Joshua
Publicado 2022

The effect of induction immunosuppression for kidney transplant on the latent HIV reservoir

por Benner, Sarah E., Eby, Yolanda, Zhu, Xianming, Fernandez, Reinaldo E., Patel, Eshan U., Ruff, Jessica E., Habtehyimer, Feben, Schmidt, Haley A., Kirby, Charles S., Hussain, Sarah, Ostrander, Darin, Desai, Niraj M., Florman, Sander, Rana, Meenakshi M., Friedman-Moraco, Rachel, Pereira, Marcus R., Mehta, Shikha, Stock, Peter, Gilbert, Alexander, Morris, Michele I., Stosor, Valentina, Mehta, Sapna A., Small, Catherine B., Ranganna, Karthik, Santos, Carlos A.Q., Aslam, Saima, Husson, Jennifer, Malinis, Maricar, Elias, Nahel, Blumberg, Emily A., Doby, Brianna L., Massie, Allan B., Smith, Melissa L., Odim, Jonah, Quinn, Thomas C., Laird, Gregory M., Siliciano, Robert F., Segev, Dorry L., Redd, Andrew D., Durand, Christine M., Tobian, Aaron A.R.
Publicado 2022