Global mapping of RNA-chromatin contacts reveals a proximity-dominated connectivity model for ncRNA-gene interactions

por Limouse, Charles, Smith, Owen K., Jukam, David, Fryer, Kelsey A., Greenleaf, William J., Straight, Aaron F.
Publicado 2023

ColoWeb: a resource for analysis of colocalization of genomic features

por Kim, RyangGuk, Smith, Owen K, Wong, Wing Chung, Ryan, Alex M, Ryan, Michael C, Aladjem, Mirit I
Publicado 2015

Identification and characterization of centromeric sequences in Xenopus laevis

por Smith, Owen K., Limouse, Charles, Fryer, Kelsey A., Teran, Nicole A., Sundararajan, Kousik, Heald, Rebecca, Straight, Aaron F.
Publicado 2021

Phosphorylated SIRT1 associates with replication origins to prevent excess replication initiation and preserve genomic stability

por Utani, Koichi, Fu, Haiqing, Jang, Sang-Min, Marks, Anna B., Smith, Owen K., Zhang, Ya, Redon, Christophe E., Shimizu, Noriaki, Aladjem, Mirit I.
Publicado 2017

Chromatin-associated RNA sequencing (ChAR-seq) maps genome-wide RNA-to-DNA contacts

por Bell, Jason C, Jukam, David, Teran, Nicole A, Risca, Viviana I, Smith, Owen K, Johnson, Whitney L, Skotheim, Jan M, Greenleaf, William James, Straight, Aaron F
Publicado 2018

DiMeLo-seq: a long-read, single-molecule method for mapping protein-DNA interactions genome-wide

por Altemose, Nicolas, Maslan, Annie, Smith, Owen K., Sundararajan, Kousik, Brown, Rachel R., Mishra, Reet, Detweiler, Angela M., Neff, Norma, Miga, Karen H., Straight, Aaron F., Streets, Aaron
Publicado 2022

Temporal association of ORCA/LRWD1 to late-firing origins during G1 dictates heterochromatin replication and organization

por Wang, Yating, Khan, Abid, Marks, Anna B., Smith, Owen K., Giri, Sumanprava, Lin, Yo-Chuen, Creager, Rachel, MacAlpine, David M., Prasanth, Kannanganattu V., Aladjem, Mirit I., Prasanth, Supriya G.
Publicado 2017

The replication initiation determinant protein (RepID) modulates replication by recruiting CUL4 to chromatin

por Jang, Sang-Min, Zhang, Ya, Utani, Koichi, Fu, Haiqing, Redon, Christophe E., Marks, Anna B., Smith, Owen K., Redmond, Catherine J., Baris, Adrian M., Tulchinsky, Danielle A., Aladjem, Mirit I.
Publicado 2018

A replicator-specific binding protein essential for site-specific initiation of DNA replication in mammalian cells

por Zhang, Ya, Huang, Liang, Fu, Haiqing, Smith, Owen K., Lin, Chii Mei, Utani, Koichi, Rao, Mishal, Reinhold, William C., Redon, Christophe E., Ryan, Michael, Kim, RyangGuk, You, Yang, Hanna, Harlington, Boisclair, Yves, Long, Qiaoming, Aladjem, Mirit I.
Publicado 2016

Distinct epigenetic features of differentiation-regulated replication origins

por Smith, Owen K., Kim, RyanGuk, Fu, Haiqing, Martin, Melvenia M., Lin, Chii Mei, Utani, Koichi, Zhang, Ya, Marks, Anna B., Lalande, Marc, Chamberlain, Stormy, Libbrecht, Maxwell W., Bouhassira, Eric E., Ryan, Michael C., Noble, William S., Aladjem, Mirit I.
Publicado 2016