miRNet 2.0: network-based visual analytics for miRNA functional analysis and systems biology

por Chang, Le, Zhou, Guangyan, Soufan, Othman, Xia, Jianguo
Publicado 2020

FastBMD: an online tool for rapid benchmark dose–response analysis of transcriptomics data

por Ewald, Jessica, Soufan, Othman, Xia, Jianguo, Basu, Niladri
Publicado 2020

DWFS: A Wrapper Feature Selection Tool Based on a Parallel Genetic Algorithm

por Soufan, Othman, Kleftogiannis, Dimitrios, Kalnis, Panos, Bajic, Vladimir B.
Publicado 2015

Systematic selection of chemical fingerprint features improves the Gibbs energy prediction of biochemical reactions

por Alazmi, Meshari, Kuwahara, Hiroyuki, Soufan, Othman, Ding, Lizhong, Gao, Xin
Publicado 2019

DASPfind: new efficient method to predict drug–target interactions

por Ba-alawi, Wail, Soufan, Othman, Essack, Magbubah, Kalnis, Panos, Bajic, Vladimir B.
Publicado 2016

DPubChem: a web tool for QSAR modeling and high-throughput virtual screening

por Soufan, Othman, Ba-alawi, Wail, Magana-Mora, Arturo, Essack, Magbubah, Bajic, Vladimir B.
Publicado 2018

A novel graph mining approach to predict and evaluate food-drug interactions

por Rahman, Md. Mostafizur, Vadrev, Srinivas Mukund, Magana-Mora, Arturo, Levman, Jacob, Soufan, Othman
Publicado 2022

DRABAL: novel method to mine large high-throughput screening assays using Bayesian active learning

por Soufan, Othman, Ba-Alawi, Wail, Afeef, Moataz, Essack, Magbubah, Kalnis, Panos, Bajic, Vladimir B.
Publicado 2016

NetworkAnalyst 3.0: a visual analytics platform for comprehensive gene expression profiling and meta-analysis

por Zhou, Guangyan, Soufan, Othman, Ewald, Jessica, Hancock, Robert E W, Basu, Niladri, Xia, Jianguo
Publicado 2019

T1000: a reduced gene set prioritized for toxicogenomic studies

por Soufan, Othman, Ewald, Jessica, Viau, Charles, Crump, Doug, Hecker, Markus, Basu, Niladri, Xia, Jianguo
Publicado 2019

Mining Chemical Activity Status from High-Throughput Screening Assays

por Soufan, Othman, Ba-alawi, Wail, Afeef, Moataz, Essack, Magbubah, Rodionov, Valentin, Kalnis, Panos, Bajic, Vladimir B.
Publicado 2015

MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis

por Chong, Jasmine, Soufan, Othman, Li, Carin, Caraus, Iurie, Li, Shuzhao, Bourque, Guillaume, Wishart, David S, Xia, Jianguo
Publicado 2018