Projecting the SARS-CoV-2 transition from pandemicity to endemicity: Epidemiological and immunological considerations

por Cohen, Lily E., Spiro, David J., Viboud, Cecile
Publicado 2022

Metagenomic Analysis of RNA Viruses in a Fresh Water Lake

por Djikeng, Appolinaire, Kuzmickas, Ryan, Anderson, Norman G., Spiro, David J.
Publicado 2009

Using Serology with Models to Clarify the Trajectory of the SARS-CoV-2 Emerging Outbreak

por Metcalf, C. Jessica E., Viboud, Cecile, Spiro, David J., Grenfell, Bryan T.
Publicado 2020

Origins and Evolution of Seasonal Human Coronaviruses

por Otieno, James R., Cherry, Joshua L., Spiro, David J., Nelson, Martha I., Trovão, Nídia S.
Publicado 2022

Spike Protein Fusion Peptide and Feline Coronavirus Virulence

por Chang, Hui-Wen, Egberink, Herman F., Halpin, Rebecca, Spiro, David J., Rottier, Peter J.M.
Publicado 2012

ANDES: Statistical tools for the ANalyses of DEep Sequencing

por Li, Kelvin, Venter, Eli, Yooseph, Shibu, Stockwell, Timothy B, Eckerle, Lance D, Denison, Mark R, Spiro, David J, Methé, Barbara A
Publicado 2010

Viral genome sequencing by random priming methods

por Djikeng, Appolinaire, Halpin, Rebecca, Kuzmickas, Ryan, DePasse, Jay, Feldblyum, Jeremy, Sengamalay, Naomi, Afonso, Claudio, Zhang, Xinsheng, Anderson, Norman G, Ghedin, Elodie, Spiro, David J
Publicado 2008

Fogarty International Center collaborative networks in infectious disease modeling: Lessons learnt in research and capacity building

por Nelson, Martha I., Lloyd-Smith, James O., Simonsen, Lone, Rambaut, Andrew, Holmes, Edward C., Chowell, Gerardo, Miller, Mark A., Spiro, David J., Grenfell, Bryan, Viboud, Cécile
Publicado 2019

Beyond clinical trials: Evolutionary and epidemiological considerations for development of a universal influenza vaccine

por Viboud, Cécile, Gostic, Katelyn, Nelson, Martha I., Price, Graeme E., Perofsky, Amanda, Sun, Kaiyuan, Sequeira Trovão, Nídia, Cowling, Benjamin J., Epstein, Suzanne L., Spiro, David J.
Publicado 2020

Molecular Epidemiology of A/H3N2 and A/H1N1 Influenza Virus during a Single Epidemic Season in the United States

por Nelson, Martha I., Edelman, Laurel, Spiro, David J., Boyne, Alex R., Bera, Jayati, Halpin, Rebecca, Ghedin, Elodie, Miller, Mark A., Simonsen, Lone, Viboud, Cecile, Holmes, Edward C.
Publicado 2008

Evolutionary Dynamics of Human Rotaviruses: Balancing Reassortment with Preferred Genome Constellations

por McDonald, Sarah M., Matthijnssens, Jelle, McAllen, John K., Hine, Erin, Overton, Larry, Wang, Shiliang, Lemey, Philippe, Zeller, Mark, Van Ranst, Marc, Spiro, David J., Patton, John T.
Publicado 2009

Correction: Molecular Epidemiology of A/H3N2 and A/H1N1 Influenza Virus during a Single Epidemic Season in the United States

por Nelson, Martha I., Edelman, Laurel, Spiro, David J., Boyne, Alex R., Bera, Jayati, Halpin, Rebecca, Sengamalay, Naomi, Ghedin, Elodie, Miller, Mark A., Simonsen, Lone, Viboud, Cecile, Holmes, Edward C.
Publicado 2008

Multiple Reassortment Events in the Evolutionary History of H1N1 Influenza A Virus Since 1918

por Nelson, Martha I., Viboud, Cécile, Simonsen, Lone, Bennett, Ryan T., Griesemer, Sara B., St. George, Kirsten, Taylor, Jill, Spiro, David J., Sengamalay, Naomi A., Ghedin, Elodie, Taubenberger, Jeffery K., Holmes, Edward C.
Publicado 2008

Infidelity of SARS-CoV Nsp14-Exonuclease Mutant Virus Replication Is Revealed by Complete Genome Sequencing

por Eckerle, Lance D., Becker, Michelle M., Halpin, Rebecca A., Li, Kelvin, Venter, Eli, Lu, Xiaotao, Scherbakova, Sana, Graham, Rachel L., Baric, Ralph S., Stockwell, Timothy B., Spiro, David J., Denison, Mark R.
Publicado 2010

Molecular Signature of High Yield (Growth) Influenza A Virus Reassortants Prepared as Candidate Vaccine Seeds

por Ramanunninair, Manojkumar, Le, Jianhua, Onodera, Shiroh, Fulvini, Andrew A., Pokorny, Barbara A., Silverman, Jeanmarie, Devis, Rene, Arroyo, Jennifer M., He, Yu, Boyne, Alex, Bera, Jayati, Halpin, Rebecca, Hine, Erin, Spiro, David J., Bucher, Doris
Publicado 2013

Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus

por Nelson, Martha I, Simonsen, Lone, Viboud, Cecile, Miller, Mark A, Taylor, Jill, George, Kirsten St, Griesemer, Sara B, Ghedin, Elodie, Sengamalay, Naomi A, Spiro, David J, Volkov, Igor, Grenfell, Bryan T, Lipman, David J, Taubenberger, Jeffery K, Holmes, Edward C
Publicado 2006

Correction: Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus

por Nelson, Martha I, Simonsen, Lone, Viboud, Cecile, Miller, Mark A, Taylor, Jill, St. George, Kirsten, Griesemer, Sara B, Ghedin, Elodie, Sengamalay, Naomi A, Spiro, David J, Volkov, Igor, Grenfell, Brian T, Lipman, David J, Taubenberger, Jeffrey K, Holmes, Edward C
Publicado 2006

The Evolutionary Genetics and Emergence of Avian Influenza Viruses in Wild Birds

por Dugan, Vivien G., Chen, Rubing, Spiro, David J., Sengamalay, Naomi, Zaborsky, Jennifer, Ghedin, Elodie, Nolting, Jacqueline, Swayne, David E., Runstadler, Jonathan A., Happ, George M., Senne, Dennis A., Wang, Ruixue, Slemons, Richard D., Holmes, Edward C., Taubenberger, Jeffery K.
Publicado 2008

Genomic and Protein Structural Maps of Adaptive Evolution of Human Influenza A Virus to Increased Virulence in the Mouse

por Ping, Jihui, Keleta, Liya, Forbes, Nicole E., Dankar, Samar, Stecho, William, Tyler, Shaun, Zhou, Yan, Babiuk, Lorne, Weingartl, Hana, Halpin, Rebecca A., Boyne, Alex, Bera, Jayati, Hostetler, Jessicah, Fedorova, Nadia B., Proudfoot, Katie, Katzel, Dan A., Stockwell, Tim B., Ghedin, Elodie, Spiro, David J., Brown, Earl G.
Publicado 2011

Epidemiology and genetic diversity of SARS-CoV-2 lineages circulating in Africa

por Okoh, Olayinka Sunday, Nii-Trebi, Nicholas Israel, Jakkari, Abdulrokeeb, Olaniran, Tosin Titus, Senbadejo, Tosin Yetunde, Kafintu-kwashie, Anna Aba, Dairo, Emmanuel Oluwatobi, Ganiyu, Tajudeen Oladunni, Akaninyene, Ifiokakaninyene Ekpo, Ezediuno, Louis Odinakaose, Adeosun, Idowu Jesulayomi, Ockiya, Michael Asebake, Jimah, Esther Moradeyo, Spiro, David J., Oladipo, Elijah Kolawole, Trovão, Nídia S.
Publicado 2021