Estimating confidence intervals in predicted responses for oscillatory biological models

por St John, Peter C, Doyle, Francis J
Publicado 2013

Quantifying Stochastic Noise in Cultured Circadian Reporter Cells

por St. John, Peter C., Doyle, Francis J.
Publicado 2015

Approaches to Computational Strain Design in the Multiomics Era

por St. John, Peter C., Bomble, Yannick J.
Publicado 2019

A quantitative metric for organic radical stability and persistence using thermodynamic and kinetic features

por Sowndarya S. V., Shree, St. John, Peter C., Paton, Robert S.
Publicado 2021

Efficient estimation of the maximum metabolic productivity of batch systems

por St. John, Peter C., Crowley, Michael F., Bomble, Yannick J.
Publicado 2017

Predicting energy and stability of known and hypothetical crystals using graph neural network

por Pandey, Shubham, Qu, Jiaxing, Stevanović, Vladan, St. John, Peter, Gorai, Prashun
Publicado 2021

Upper-Bound Energy Minimization to Search for Stable Functional Materials with Graph Neural Networks

por Law, Jeffrey N., Pandey, Shubham, Gorai, Prashun, St. John, Peter C.
Publicado 2022

Prediction of reaction knockouts to maximize succinate production by Actinobacillus succinogenes

por Nag, Ambarish, St. John, Peter C., Crowley, Michael F., Bomble, Yannick J.
Publicado 2018

Prediction of organic homolytic bond dissociation enthalpies at near chemical accuracy with sub-second computational cost

por St. John, Peter C., Guan, Yanfei, Kim, Yeonjoon, Kim, Seonah, Paton, Robert S.
Publicado 2020

Publisher Correction: Prediction of organic homolytic bond dissociation enthalpies at near chemical accuracy with sub-second computational cost

por St. John, Peter C., Guan, Yanfei, Kim, Yeonjoon, Kim, Seonah, Paton, Robert S.
Publicado 2020

Thermodynamic and Kinetic Modeling of Co-utilization of Glucose and Xylose for 2,3-BDO Production by Zymomonas mobilis

por Wu, Chao, Spiller, Ryan, Dowe, Nancy, Bomble, Yannick J., St. John, Peter C.
Publicado 2021

Advances in integrative structural biology: Towards understanding protein complexes in their cellular context

por Ziegler, Samantha J., Mallinson, Sam J.B., St. John, Peter C., Bomble, Yannick J.
Publicado 2020

Real-time prediction of (1)H and (13)C chemical shifts with DFT accuracy using a 3D graph neural network

por Guan, Yanfei, Shree Sowndarya, S. V., Gallegos, Liliana C., St. John, Peter C., Paton, Robert S.
Publicado 2021

Quantum chemical calculations for over 200,000 organic radical species and 40,000 associated closed-shell molecules

por St. John, Peter C., Guan, Yanfei, Kim, Yeonjoon, Etz, Brian D., Kim, Seonah, Paton, Robert S.
Publicado 2020

Bayesian inference of metabolic kinetics from genome-scale multiomics data

por St. John, Peter C., Strutz, Jonathan, Broadbelt, Linda J., Tyo, Keith E. J., Bomble, Yannick J.
Publicado 2019

Identification and preliminary characterization of conserved uncharacterized proteins from Chlamydomonas reinhardtii , Arabidopsis thaliana , and Setaria viridis

por Knoshaug, Eric P., Sun, Peipei, Nag, Ambarish, Nguyen, Huong, Mattoon, Erin M., Zhang, Ningning, Liu, Jian, Chen, Chen, Cheng, Jianlin, Zhang, Ru, St. John, Peter, Umen, James
Publicado 2023

PolyID: Artificial Intelligence for Discovering Performance-Advantaged and Sustainable Polymers

por Wilson, A. Nolan, St John, Peter C., Marin, Daniela H., Hoyt, Caroline B., Rognerud, Erik G., Nimlos, Mark R., Cywar, Robin M., Rorrer, Nicholas A., Shebek, Kevin M., Broadbelt, Linda J., Beckham, Gregg T., Crowley, Michael F.
Publicado 2023

Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering

por Ling, Chen, Peabody, George L., Salvachúa, Davinia, Kim, Young-Mo, Kneucker, Colin M., Calvey, Christopher H., Monninger, Michela A., Munoz, Nathalie Munoz, Poirier, Brenton C., Ramirez, Kelsey J., St. John, Peter C., Woodworth, Sean P., Magnuson, Jon K., Burnum-Johnson, Kristin E., Guss, Adam M., Johnson, Christopher W., Beckham, Gregg T.
Publicado 2022