Conformational flexibility of adenine riboswitch aptamer in apo and bound states using NMR and an X-ray free electron laser

por Ding, Jienv, Swain, Monalisa, Yu, Ping, Stagno, Jason R., Wang, Yun-Xing
Publicado 2019

Heavy-atom labeling of RNA by PLOR for de novo crystallographic phasing

por Stagno, Jason R., Yu, Ping, Dyba, Marzena A., Wang, Yun-Xing, Liu, Yu
Publicado 2019

FMN riboswitch aptamer symmetry facilitates conformational switching through mutually exclusive coaxial stacking configurations

por Wilt, Haley M., Yu, Ping, Tan, Kemin, Wang, Yun-Xing, Stagno, Jason R.
Publicado 2020

Dependence of phase transition uniformity on crystal sizes characterized using birefringence

por Ramakrishnan, Saminathan, Stagno, Jason R., Magidson, Valentin, Heinz, William F., Wang, Yun-Xing
Publicado 2021

Crystal Structure of a Plectonemic RNA Supercoil

por Stagno, Jason R., Ma, Buyong, Li, Jess, Altieri, Amanda S., Byrd, R. Andrew, Ji, Xinhua
Publicado 2012

The mechanism driving a solid–solid phase transition in a biomacromolecular crystal

por Ramakrishnan, Saminathan, Stagno, Jason R., Heinz, William F., Zuo, Xiaobing, Yu, Ping, Wang, Yun-Xing
Publicado 2021

Structural basis for RNA recognition by NusB and NusE in the initiation of transcription antitermination

por Stagno, Jason R., Altieri, Amanda S., Bubunenko, Mikhail, Tarasov, Sergey G., Li, Jess, Court, Donald L., Byrd, R. Andrew, Ji, Xinhua
Publicado 2011

Developing methods to study conformational changes in RNA crystals using a photocaged ligand

por Lee, Hyun Kyung, Conrad, Chelsie E., Magidson, Valentin, Heinz, William F., Pauly, Gary, Yu, Ping, Ramakrishnan, Saminathan, Stagno, Jason R., Wang, Yun-Xing
Publicado 2022

Determining structures of individual RNA conformers using atomic force microscopy images and deep neural networks

por Degenhardt, Maximilia F. S., Degenhardt, Hermann F., Bhandari, Yuba R., Lee, Yun-Tzai, Ding, Jienyu, Heinz, William F., Stagno, Jason R., Schwieters, Charles D., Zhang, Jinwei, Wang, Yun-Xing
Publicado 2023

RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting

por Rajappa-Titu, Lional, Suematsu, Takuma, Munoz-Tello, Paola, Long, Marius, Demir, Özlem, Cheng, Kevin J., Stagno, Jason R., Luecke, Hartmut, Amaro, Rommie E., Aphasizheva, Inna, Aphasizhev, Ruslan, Thore, Stéphane
Publicado 2016

Visualizing RNA conformational and architectural heterogeneity in solution

por Ding, Jienyu, Lee, Yun-Tzai, Bhandari, Yuba, Schwieters, Charles D., Fan, Lixin, Yu, Ping, Tarosov, Sergey G., Stagno, Jason R., Ma, Buyong, Nussinov, Ruth, Rein, Alan, Zhang, Jinwei, Wang, Yun-Xing
Publicado 2023

Synthesis and applications of RNAs with position-selective labeling and mosaic composition

por Liu, Yu, Holmstrom, Erik, Zhang, Jinwei, Yu, Ping, Wang, Jinbu, Dyba, Marzena A., Chen, De, Ying, Jinfa, Lockett, Stephen, Nesbitt, David J., Ferré-D'Amaré, Adrian R., Sousa, Rui, Stagno, Jason R., Wang, Yun-Xing
Publicado 2015

Synchronous RNA conformational changes trigger ordered phase transitions in crystals

por Ramakrishnan, Saminathan, Stagno, Jason R., Conrad, Chelsie E., Ding, Jienyu, Yu, Ping, Bhandari, Yuba R., Lee, Yun-Tzai, Pauly, Gary, Yefanov, Oleksandr, Wiedorn, Max O., Knoska, Juraj, Oberthür, Dominik, White, Thomas A., Barty, Anton, Mariani, Valerio, Li, Chufeng, Brehm, Wolfgang, Heinz, William F., Magidson, Valentin, Lockett, Stephen, Hunter, Mark S., Boutet, Sébastien, Zatsepin, Nadia A., Zuo, Xiaobing, Grant, Thomas D., Pandey, Suraj, Schmidt, Marius, Spence, John C. H., Chapman, Henry N., Wang, Yun-Xing
Publicado 2021