From Pine Cones to Read Clouds: Rescaffolding the Megagenome of Sugar Pine (Pinus lambertiana)

por Crepeau, Marc W., Langley, Charles H., Stevens, Kristian A.
Publicado 2017

Sequencing a Strawberry Germplasm Collection Reveals New Viral Genetic Diversity and the Basis for New RT-qPCR Assays

por Diaz-Lara, Alfredo, Stevens, Kristian A., Klaassen, Vicki, Hwang, Min Sook, Al Rwahnih, Maher
Publicado 2021

Quality Assessment and Validation of High-Throughput Sequencing for Grapevine Virus Diagnostics

por Soltani, Nourolah, Stevens, Kristian A., Klaassen, Vicki, Hwang, Min-Sook, Golino, Deborah A., Al Rwahnih, Maher
Publicado 2021

The Drosophila Genome Nexus: A Population Genomic Resource of 623 Drosophila melanogaster Genomes, Including 197 from a Single Ancestral Range Population

por Lack, Justin B., Cardeno, Charis M., Crepeau, Marc W., Taylor, William, Corbett-Detig, Russell B., Stevens, Kristian A., Langley, Charles H., Pool, John E.
Publicado 2015

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

por Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Publicado 2017

Erratum to: An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

por Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Publicado 2017

Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana)

por Gonzalez-Ibeas, Daniel, Martinez-Garcia, Pedro J., Famula, Randi A., Delfino-Mix, Annette, Stevens, Kristian A., Loopstra, Carol A., Langley, Charles H., Neale, David B., Wegrzyn, Jill L.
Publicado 2016

Population Genomics of Sub-Saharan Drosophila melanogaster: African Diversity and Non-African Admixture

por Pool, John E., Corbett-Detig, Russell B., Sugino, Ryuichi P., Stevens, Kristian A., Cardeno, Charis M., Crepeau, Marc W., Duchen, Pablo, Emerson, J. J., Saelao, Perot, Begun, David J., Langley, Charles H.
Publicado 2012

A new genomic tool for walnut (Juglans regia L.): development and validation of the high‐density Axiom™ J. regia 700K SNP genotyping array

por Marrano, Annarita, Martínez‐García, Pedro J., Bianco, Luca, Sideli, Gina M., Di Pierro, Erica A., Leslie, Charles A., Stevens, Kristian A., Crepeau, Marc W., Troggio, Michela, Langley, Charles H., Neale, David B.
Publicado 2018

Sequencing and Assembly of the 22-Gb Loblolly Pine Genome

por Zimin, Aleksey, Stevens, Kristian A., Crepeau, Marc W., Holtz-Morris, Ann, Koriabine, Maxim, Marçais, Guillaume, Puiu, Daniela, Roberts, Michael, Wegrzyn, Jill L., de Jong, Pieter J., Neale, David B., Salzberg, Steven L., Yorke, James A., Langley, Charles H.
Publicado 2014

Genomic Variation Among and Within Six Juglans Species

por Stevens, Kristian A., Woeste, Keith, Chakraborty, Sandeep, Crepeau, Marc W., Leslie, Charles A., Martínez-García, Pedro J., Puiu, Daniela, Romero-Severson, Jeanne, Coggeshall, Mark, Dandekar, Abhaya M., Kluepfel, Daniel, Neale, David B., Salzberg, Steven L., Langley, Charles H.
Publicado 2018

Insights into the Loblolly Pine Genome: Characterization of BAC and Fosmid Sequences

por Wegrzyn, Jill L., Lin, Brian Y., Zieve, Jacob J., Dougherty, William M., Martínez-García, Pedro J., Koriabine, Maxim, Holtz-Morris, Ann, deJong, Pieter, Crepeau, Marc, Langley, Charles H., Puiu, Daniela, Salzberg, Steven L., Neale, David B., Stevens, Kristian A.
Publicado 2013

The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae

por Neale, David B., McGuire, Patrick E., Wheeler, Nicholas C., Stevens, Kristian A., Crepeau, Marc W., Cardeno, Charis, Zimin, Aleksey V., Puiu, Daniela, Pertea, Geo M., Sezen, U. Uzay, Casola, Claudio, Koralewski, Tomasz E., Paul, Robin, Gonzalez-Ibeas, Daniel, Zaman, Sumaira, Cronn, Richard, Yandell, Mark, Holt, Carson, Langley, Charles H., Yorke, James A., Salzberg, Steven L., Wegrzyn, Jill L.
Publicado 2017

Unique Features of the Loblolly Pine (Pinus taeda L.) Megagenome Revealed Through Sequence Annotation

por Wegrzyn, Jill L., Liechty, John D., Stevens, Kristian A., Wu, Le-Shin, Loopstra, Carol A., Vasquez-Gross, Hans A., Dougherty, William M., Lin, Brian Y., Zieve, Jacob J., Martínez-García, Pedro J., Holt, Carson, Yandell, Mark, Zimin, Aleksey V., Yorke, James A., Crepeau, Marc W., Puiu, Daniela, Salzberg, Steven L., de Jong, Pieter J., Mockaitis, Keithanne, Main, Doreen, Langley, Charles H., Neale, David B.
Publicado 2014

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

por Neale, David B, Wegrzyn, Jill L, Stevens, Kristian A, Zimin, Aleksey V, Puiu, Daniela, Crepeau, Marc W, Cardeno, Charis, Koriabine, Maxim, Holtz-Morris, Ann E, Liechty, John D, Martínez-García, Pedro J, Vasquez-Gross, Hans A, Lin, Brian Y, Zieve, Jacob J, Dougherty, William M, Fuentes-Soriano, Sara, Wu, Le-Shin, Gilbert, Don, Marçais, Guillaume, Roberts, Michael, Holt, Carson, Yandell, Mark, Davis, John M, Smith, Katherine E, Dean, Jeffrey FD, Lorenz, W Walter, Whetten, Ross W, Sederoff, Ronald, Wheeler, Nicholas, McGuire, Patrick E, Main, Doreen, Loopstra, Carol A, Mockaitis, Keithanne, deJong, Pieter J, Yorke, James A, Salzberg, Steven L, Langley, Charles H
Publicado 2014