Small Alarmone Synthetase SasA Expression Leads to Concomitant Accumulation of pGpp, ppApp, and AppppA in Bacillus subtilis

por Fung, Danny K., Yang, Jin, Stevenson, David M., Amador-Noguez, Daniel, Wang, Jue D.
Publicado 2020

Listeria monocytogenes requires DHNA-dependent intracellular redox homeostasis facilitated by Ndh2 for survival and virulence

por Smith, Hans B., Lee, Kijeong, Stevenson, David M., Amador-Noguez, Daniel, Sauer, John-Demian
Publicado 2023

Phenolic Amides Are Potent Inhibitors of De Novo Nucleotide Biosynthesis

por Pisithkul, Tippapha, Jacobson, Tyler B., O'Brien, Thomas J., Stevenson, David M., Amador-Noguez, Daniel
Publicado 2015

Exogenous butyrate inhibits butyrogenic metabolism and alters expression of virulence genes in Clostridioides difficile

por Pensinger, Daniel A., Dobrila, Horia A., Stevenson, David M., Davis, Nicole M., Amador-Noguez, Daniel, Hryckowian, Andrew J.
Publicado 2023

Bacterial communities in the rumen of Holstein heifers differ when fed orchardgrass as pasture vs. hay

por Mohammed, Riazuddin, Brink, Geoffrey E., Stevenson, David M., Neumann, Anthony P., Beauchemin, Karen A., Suen, Garret, Weimer, Paul J.
Publicado 2014

Systems-Level Analysis of Oxygen Exposure in Zymomonas mobilis: Implications for Isoprenoid Production

por Martien, Julia I., Hebert, Alexander S., Stevenson, David M., Regner, Matthew R., Khana, Daven B., Coon, Joshua J., Amador-Noguez, Daniel
Publicado 2019

The nucleotide pGpp acts as a third alarmone in Bacillus, with functions distinct from those of (p)ppGpp

por Yang, Jin, Anderson, Brent W., Turdiev, Asan, Turdiev, Husan, Stevenson, David M., Amador-Noguez, Daniel, Lee, Vincent T., Wang, Jue D.
Publicado 2020

Metabolic Fluxes of Nitrogen and Pyrophosphate in Chemostat Cultures of Clostridium thermocellum and Thermoanaerobacterium saccharolyticum

por Holwerda, Evert K., Zhou, Jilai, Hon, Shuen, Stevenson, David M., Amador-Noguez, Daniel, Lynd, Lee R., van Dijken, Johannes P.
Publicado 2020

Design of synthetic human gut microbiome assembly and butyrate production

por Clark, Ryan L., Connors, Bryce M., Stevenson, David M., Hromada, Susan E., Hamilton, Joshua J., Amador-Noguez, Daniel, Venturelli, Ophelia S.
Publicado 2021

Author Correction: The nucleotide pGpp acts as a third alarmone in Bacillus, with functions distinct from those of (p)ppGpp

por Yang, Jin, Anderson, Brent W., Turdiev, Asan, Turdiev, Husan, Stevenson, David M., Amador-Noguez, Daniel, Lee, Vincent T., Wang, Jue D.
Publicado 2021

Metabolic Promiscuity of an Orphan Small Alarmone Hydrolase Facilitates Bacterial Environmental Adaptation

por Fung, Danny K., Bai, Kaihong, Yang, Jin, Xu, Xiaoli, Stevenson, David M., Amador-Noguez, Daniel, Luo, Laixin, Wang, Jue D.
Publicado 2022

Unique aspects of fiber degradation by the ruminal ethanologen Ruminococcus albus 7 revealed by physiological and transcriptomic analysis

por Christopherson, Melissa R, Dawson, John A, Stevenson, David M, Cunningham, Andrew C, Bramhacharya, Shanti, Weimer, Paul J, Kendziorski, Christina, Suen, Garret
Publicado 2014

In Vivo Thermodynamic Analysis of Glycolysis in Clostridium thermocellum and Thermoanaerobacterium saccharolyticum Using (13)C and (2)H Tracers

por Jacobson, Tyler B., Korosh, Travis K., Stevenson, David M., Foster, Charles, Maranas, Costas, Olson, Daniel G., Lynd, Lee R., Amador-Noguez, Daniel
Publicado 2020

Metabolic Remodeling during Nitrogen Fixation in Zymomonas mobilis

por Martien, Julia I., Trujillo, Edna A., Jacobson, Tyler B., Tatli, Mehmet, Hebert, Alexander S., Stevenson, David M., Coon, Joshua J., Amador-Noguez, Daniel
Publicado 2021

Metabolic Remodeling during Biofilm Development of Bacillus subtilis

por Pisithkul, Tippapha, Schroeder, Jeremy W., Trujillo, Edna A., Yeesin, Ponlkrit, Stevenson, David M., Chaiamarit, Tai, Coon, Joshua J., Wang, Jue D., Amador-Noguez, Daniel
Publicado 2019

Phagocytes produce prostaglandin E(2) in response to cytosolic Listeria monocytogenes

por McDougal, Courtney E., Morrow, Zachary T., Christopher, Tighe, Kim, Seonyoung, Carter, Drake, Stevenson, David M., Amador-Noguez, Daniel, Miller, Mark J., Sauer, John-Demian
Publicado 2021

The pentose phosphate pathway of cellulolytic clostridia relies on 6-phosphofructokinase instead of transaldolase

por Koendjbiharie, Jeroen G., Hon, Shuen, Pabst, Martin, Hooftman, Robert, Stevenson, David M., Cui, Jingxuan, Amador-Noguez, Daniel, Lynd, Lee R., Olson, Daniel G., van Kranenburg, Richard
Publicado 2020

Metabolic and evolutionary responses of Clostridium thermocellum to genetic interventions aimed at improving ethanol production

por Holwerda, Evert K., Olson, Daniel G., Ruppertsberger, Natalie M., Stevenson, David M., Murphy, Sean J. L., Maloney, Marybeth I., Lanahan, Anthony A., Amador-Noguez, Daniel, Lynd, Lee R.
Publicado 2020

Reformulation of an extant ATPase active site to mimic ancestral GTPase activity reveals a nucleotide base requirement for function

por Updegrove, Taylor B, Harke, Jailynn, Anantharaman, Vivek, Yang, Jin, Gopalan, Nikhil, Wu, Di, Piszczek, Grzegorz, Stevenson, David M, Amador-Noguez, Daniel, Wang, Jue D, Aravind, L, Ramamurthi, Kumaran S
Publicado 2021

Systematic Analysis of Metabolic Bottlenecks in the Methylerythritol 4-Phosphate (MEP) Pathway of Zymomonas mobilis

por Khana, Daven B., Tatli, Mehmet, Rivera Vazquez, Julio, Weraduwage, Sarathi M., Stern, Noah, Hebert, Alexander S., Angelica Trujillo, Edna, Stevenson, David M., Coon, Joshua J., Sharky, Thomas D., Amador-Noguez, Daniel
Publicado 2023