scDemultiplex: An iterative beta-binomial model-based method for accurate demultiplexing with hashtag oligos

por Huang, Li-Ching, Stolze, Lindsey K., Chen, Hua-Chang, Gelbard, Alexander, Shyr, Yu, Liu, Qi, Sheng, Quanhu
Publicado 2023

Transcriptional networks specifying homeostatic and inflammatory programs of gene expression in human aortic endothelial cells

por Hogan, Nicholas T, Whalen, Michael B, Stolze, Lindsey K, Hadeli, Nizar K, Lam, Michael T, Springstead, James R, Glass, Christopher K, Romanoski, Casey E
Publicado 2017

Functional noncoding SNPs in human endothelial cells fine-map vascular trait associations

por Toropainen, Anu, Stolze, Lindsey K., Örd, Tiit, Whalen, Michael B., Torrell, Paula Martí, Link, Verena M., Kaikkonen, Minna U., Romanoski, Casey E.
Publicado 2022

Single cell ‘omic profiles of human aortic endothelial cells in vitro and human atherosclerotic lesions ex vivo reveals heterogeneity of endothelial subtype and response to activat...

por Adelus, Maria L., Ding, Jiacheng, Tran, Binh T., Conklin, Austin C., Golebiewski, Anna K., Stolze, Lindsey K., Whalen, Michael B., Cusanovich, Darren A., Romanoski, Casey E.
Publicado 2023

Single-Cell Epigenomics and Functional Fine-Mapping of Atherosclerosis GWAS Loci

por Örd, Tiit, Õunap, Kadri, Stolze, Lindsey K., Aherrahrou, Redouane, Nurminen, Valtteri, Toropainen, Anu, Selvarajan, Ilakya, Lönnberg, Tapio, Aavik, Einari, Ylä-Herttuala, Seppo, Civelek, Mete, Romanoski, Casey E., Kaikkonen, Minna U.
Publicado 2021

Systematic analysis of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs

por Shen, Zeyang, Li, Rick Z, Prohaska, Thomas A, Hoeksema, Marten A, Spann, Nathan J, Tao, Jenhan, Fonseca, Gregory J, Le, Thomas, Stolze, Lindsey K, Sakai, Mashito, Romanoski, Casey E, Glass, Christopher K
Publicado 2022

Genetic variant at coronary artery disease and ischemic stroke locus 1p32.2 regulates endothelial responses to hemodynamics

por Krause, Matthew D., Huang, Ru-Ting, Wu, David, Shentu, Tzu-Pin, Harrison, Devin L., Whalen, Michael B., Stolze, Lindsey K., Di Rienzo, Anna, Moskowitz, Ivan P., Civelek, Mete, Romanoski, Casey E., Fang, Yun
Publicado 2018

Breast tumor stiffness instructs bone metastasis via maintenance of mechanical conditioning

por Watson, Adam W., Grant, Adam D., Parker, Sara S., Hill, Samantha, Whalen, Michael B., Chakrabarti, Jayati, Harman, Michael W., Roman, Mackenzie R., Forte, Brittany L., Gowan, Cody C., Castro-Portuguez, Raúl, Stolze, Lindsey K., Franck, Christian, Cusanovich, Darren A., Zavros, Yana, Padi, Megha, Romanoski, Casey E., Mouneimne, Ghassan
Publicado 2021