Methodologies for the De novo Discovery of Transposable Element Families

por Storer, Jessica M., Hubley, Robert, Rosen, Jeb, Smit, Arian F. A.
Publicado 2022

Extensive Independent Amplification of Platy-1 Retroposons in Tamarins, Genus Saguinus

por Storer, Jessica M., Walker, Jerilyn A., Beckstrom, Thomas O., Batzer, Mark A.
Publicado 2023

Cebidae Alu Element Alignments and a Complex Non-Human Primate Radiation

por Storer, Jessica M., Walker, Jerilyn A., Brown, Morgan A., Batzer, Mark A.
Publicado 2022

Framework of the Alu Subfamily Evolution in the Platyrrhine Three-Family Clade of Cebidae, Callithrichidae, and Aotidae

por Storer, Jessica M., Walker, Jerilyn A., Baker, Jasmine N., Hossain, Shifat, Roos, Christian, Wheeler, Travis J., Batzer, Mark A.
Publicado 2023

Owl Monkey Alu Insertion Polymorphisms and Aotus Phylogenetics

por Storer, Jessica M., Walker, Jerilyn A., Rewerts, Lydia C., Brown, Morgan A., Beckstrom, Thomas O., Herke, Scott W., Roos, Christian, Batzer, Mark A.
Publicado 2022

Recently Integrated Alu Elements in Capuchin Monkeys: A Resource for Cebus/Sapajus Genomics

por Storer, Jessica M., Walker, Jerilyn A., Rockwell, Catherine E., Mores, Grayce, Beckstrom, Thomas O., Orkin, Joseph D., Melin, Amanda D., Phillips, Kimberley A., Roos, Christian, Batzer, Mark A.
Publicado 2022

Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry

por Walker, Jerilyn A., Jordan, Vallmer E., Storer, Jessica M., Steely, Cody J., Gonzalez-Quiroga, Paulina, Beckstrom, Thomas O., Rewerts, Lydia C., St. Romain, Corey P., Rockwell, Catherine E., Rogers, Jeffrey, Jolly, Clifford J., Konkel, Miriam K., Batzer, Mark A.
Publicado 2019

Amplification Dynamics of Platy-1 Retrotransposons in the Cebidae Platyrrhine Lineage

por Storer, Jessica M, Mierl, Jackson R, Brantley, Sarah A, Threeton, Breanna, Sukharutski, Yahor, Rewerts, Lydia C, St. Romain, Corey P, Foreman, Madeline M, Baker, Jasmine N, Walker, Jerilyn A, Orkin, Joseph D, Melin, Amanda D, Phillips, Kimberley A, Konkel, Miriam K, Batzer, Mark A
Publicado 2019

Chiropterans Are a Hotspot for Horizontal Transfer of DNA Transposons in Mammalia

por Paulat, Nicole S, Storer, Jessica M, Moreno-Santillán, Diana D, Osmanski, Austin B, Sullivan, Kevin A M, Grimshaw, Jenna R, Korstian, Jennifer, Halsey, Michaela, Garcia, Carlos J, Crookshanks, Claudia, Roberts, Jaquelyn, Smit, Arian F A, Hubley, Robert, Rosen, Jeb, Teeling, Emma C, Vernes, Sonja C, Myers, Eugene, Pippel, Martin, Brown, Thomas, Hiller, Michael, Rojas, Danny, Dávalos, Liliana M, Lindblad-Toh, Kerstin, Karlsson, Elinor K, Ray, David A
Publicado 2023

A high-quality bonobo genome refines the analysis of hominid evolution

por Mao, Yafei, Catacchio, Claudia R., Hillier, LaDeana W., Porubsky, David, Li, Ruiyang, Sulovari, Arvis, Fernandes, Jason D., Montinaro, Francesco, Gordon, David S., Storer, Jessica M., Haukness, Marina, Fiddes, Ian T., Murali, Shwetha Canchi, Dishuck, Philip C., Hsieh, PingHsun, Harvey, William T., Audano, Peter A., Mercuri, Ludovica, Piccolo, Ilaria, Antonacci, Francesca, Munson, Katherine M., Lewis, Alexandra P., Baker, Carl, Underwood, Jason G., Hoekzema, Kendra, Huang, Tzu-Hsueh, Sorensen, Melanie, Walker, Jerilyn A., Hoffman, Jinna, Thibaud-Nissen, Françoise, Salama, Sofie R., Pang, Andy W. C., Lee, Joyce, Hastie, Alex R., Paten, Benedict, Batzer, Mark A., Diekhans, Mark, Ventura, Mario, Eichler, Evan E.
Publicado 2021

The transposable element-rich genome of the cereal pest Sitophilus oryzae

por Parisot, Nicolas, Vargas-Chávez, Carlos, Goubert, Clément, Baa-Puyoulet, Patrice, Balmand, Séverine, Beranger, Louis, Blanc, Caroline, Bonnamour, Aymeric, Boulesteix, Matthieu, Burlet, Nelly, Calevro, Federica, Callaerts, Patrick, Chancy, Théo, Charles, Hubert, Colella, Stefano, Da Silva Barbosa, André, Dell’Aglio, Elisa, Di Genova, Alex, Febvay, Gérard, Gabaldón, Toni, Galvão Ferrarini, Mariana, Gerber, Alexandra, Gillet, Benjamin, Hubley, Robert, Hughes, Sandrine, Jacquin-Joly, Emmanuelle, Maire, Justin, Marcet-Houben, Marina, Masson, Florent, Meslin, Camille, Montagné, Nicolas, Moya, Andrés, Ribeiro de Vasconcelos, Ana Tereza, Richard, Gautier, Rosen, Jeb, Sagot, Marie-France, Smit, Arian F. A., Storer, Jessica M., Vincent-Monegat, Carole, Vallier, Agnès, Vigneron, Aurélien, Zaidman-Rémy, Anna, Zamoum, Waël, Vieira, Cristina, Rebollo, Rita, Latorre, Amparo, Heddi, Abdelaziz
Publicado 2021

The complete sequence of a human genome*

por Nurk, Sergey, Koren, Sergey, Rhie, Arang, Rautiainen, Mikko, Bzikadze, Andrey V., Mikheenko, Alla, Vollger, Mitchell R., Altemose, Nicolas, Uralsky, Lev, Gershman, Ariel, Aganezov, Sergey, Hoyt, Savannah J., Diekhans, Mark, Logsdon, Glennis A., Alonge, Michael, Antonarakis, Stylianos E., Borchers, Matthew, Bouffard, Gerard G., Brooks, Shelise Y., Caldas, Gina V., Chen, Nae-Chyun, Cheng, Haoyu, Chin, Chen-Shan, Chow, William, de Lima, Leonardo G., Dishuck, Philip C., Durbin, Richard, Dvorkina, Tatiana, Fiddes, Ian T., Formenti, Giulio, Fulton, Robert S., Fungtammasan, Arkarachai, Garrison, Erik, Grady, Patrick G.S., Graves-Lindsay, Tina A., Hall, Ira M., Hansen, Nancy F., Hartley, Gabrielle A., Haukness, Marina, Howe, Kerstin, Hunkapiller, Michael W., Jain, Chirag, Jain, Miten, Jarvis, Erich D., Kerpedjiev, Peter, Kirsche, Melanie, Kolmogorov, Mikhail, Korlach, Jonas, Kremitzki, Milinn, Li, Heng, Maduro, Valerie V., Marschall, Tobias, McCartney, Ann M., McDaniel, Jennifer, Miller, Danny E., Mullikin, James C., Myers, Eugene W., Olson, Nathan D., Paten, Benedict, Peluso, Paul, Pevzner, Pavel A., Porubsky, David, Potapova, Tamara, Rogaev, Evgeny I., Rosenfeld, Jeffrey A., Salzberg, Steven L., Schneider, Valerie A., Sedlazeck, Fritz J., Shafin, Kishwar, Shew, Colin J., Shumate, Alaina, Sims, Ying, Smit, Arian F. A., Soto, Daniela C., Sović, Ivan, Storer, Jessica M., Streets, Aaron, Sullivan, Beth A., Thibaud-Nissen, Françoise, Torrance, James, Wagner, Justin, Walenz, Brian P., Wenger, Aaron, Wood, Jonathan M. D., Xiao, Chunlin, Yan, Stephanie M., Young, Alice C., Zarate, Samantha, Surti, Urvashi, McCoy, Rajiv C., Dennis, Megan Y., Alexandrov, Ivan A., Gerton, Jennifer L., O’Neill, Rachel J., Timp, Winston, Zook, Justin M., Schatz, Michael C., Eichler, Evan E., Miga, Karen H., Phillippy, Adam M.
Publicado 2022