Optimization of parasite DNA enrichment approaches to generate whole genome sequencing data for Plasmodium falciparum from low parasitaemia samples

por Shah, Zalak, Adams, Matthew, Moser, Kara A., Shrestha, Biraj, Stucke, Emily M., Laufer, Miriam K., Serre, David, Silva, Joana C., Takala-Harrison, Shannon
Publicado 2020

272 Differential expression of two Plasmodium falciparum variant surface antigen families in Malian children with cerebral malaria compared to mild malaria

por Lawton, Jonathan G., Zhou, Albert E., Coulibaly, Drissa, Stucke, Emily M., Dara, Antoine, Laurens, Matthew B., Silva, Joana C., Thera, Mahamadou A., Travassos, Mark A.
Publicado 2023

Cadherin 26 is an alpha integrin-binding epithelial receptor regulated during allergic inflammation

por Caldwell, Julie M., Collins, Margaret H., Kemme, Katherine A., Sherrill, Joseph D., Wen, Ting, Rochman, Mark, Stucke, Emily M., Amin, Lissa, Tai, Haitong, Putnam, Philip E., Jiménez-Dalmaroni, Maximiliano J., Wormald, Mark R., Porollo, Aleksey, Abonia, J. Pablo, Rothenberg, ME
Publicado 2017

Malian adults maintain serologic responses to virulent PfEMP1s amid seasonal patterns of fluctuation

por Ventimiglia, Noah T., Stucke, Emily M., Coulibaly, Drissa, Berry, Andrea A., Lyke, Kirsten E., Laurens, Matthew B., Bailey, Jason A., Adams, Matthew, Niangaly, Amadou, Kone, Abdoulaye K., Takala-Harrison, Shannon, Kouriba, Bourema, Doumbo, Ogobara K., Felgner, Phillip L., Plowe, Christopher V., Thera, Mahamadou A., Travassos, Mark A.
Publicado 2021

Gene expression analyses reveal differences in children’s response to malaria according to their age

por Tebben, Kieran, Yirampo, Salif, Coulibaly, Drissa, Koné, Abdoulaye K., Laurens, Matthew B., Stucke, Emily M., Dembélé, Ahmadou, Tolo, Youssouf, Traoré, Karim, Niangaly, Amadou, Berry, Andrea A., Kouriba, Bourema, Plowe, Christopher V., Doumbo, Ogobara K, Lyke, Kirsten E., Takala-Harrison, Shannon, Thera, Mahamadou A., Travassos, Mark A., Serre, David
Publicado 2023

Analysis and expansion of the eosinophilic esophagitis transcriptome by RNA sequencing

por Sherrill, Joseph D., Kiran, KC, Blanchard, Carine, Stucke, Emily M., Kemme, Katherine A., Collins, Margaret H., Abonia, J. Pablo, Putnam, Philip E., Mukkada, Vincent A., Kaul, Ajay, Kocoshis, Samuel A., Kushner, Jonathan P., Plassard, Andrew J., Karns, Rebekah A., Dexheimer, Phillip J., Aronow, Bruce J., Rothenberg, Marc E.
Publicado 2014

Malian children infected with Plasmodium ovale and Plasmodium falciparum display very similar gene expression profiles

por Tebben, Kieran, Yirampo, Salif, Coulibaly, Drissa, Koné, Abdoulaye K., Laurens, Matthew B., Stucke, Emily M., Dembélé, Ahmadou, Tolo, Youssouf, Traoré, Karim, Niangaly, Amadou, Berry, Andrea A., Kouriba, Bourema, Plowe, Christopher V., Doumbo, Ogobara K., Lyke, Kirsten E., Takala-Harrison, Shannon, Thera, Mahamadou A., Travassos, Mark A., Serre, David
Publicado 2023

Genetic variants at the 16p13 locus confer risk for eosinophilic esophagitis

por Kottyan, Leah C., Maddox, Avery, Braxton, Julian R., Stucke, Emily M., Mukkada, Vince, Putnam, Philip E., Abonia, J. Pablo, Chehade, Mirna, Wood, Robert A., Pesek, Robbie D., Vickery, Brian P., Furuta, Glenn T., Dawson, Peter, Sampson, Hugh A., Martin, Lisa J., Kelly, Jennifer A., Kimberly, Robert P., Sivils, Kathy, Gaffney, Patrick M., Kaufman, Kenneth, Harley, John B., Rothenberg, Marc E.
Publicado 2018

Serologic responses to the PfEMP1 DBL-CIDR head structure may be a better indicator of malaria exposure than those to the DBL-α tag

por Stucke, Emily M., Niangaly, Amadou, Berry, Andrea A., Bailey, Jason A., Coulibaly, Drissa, Ouattara, Amed, Lyke, Kirsten E., Laurens, Matthew B., Dara, Antoine, Adams, Matthew, Pablo, Jozelyn, Jasinskas, Algis, Nakajima, Rie, Zhou, Albert E., Agrawal, Sonia, Friedman-Klabanoff, DeAnna J., Takala-Harrison, Shannon, Kouriba, Bourema, Kone, Abdoulaye K., Rowe, J. Alexandra, Doumbo, Ogobara K., Felgner, Philip L., Thera, Mahamadou A., Plowe, Christopher V., Travassos, Mark A.
Publicado 2019

Natural immunity to malaria preferentially targets the endothelial protein C receptor-binding regions of PfEMP1s

por Tewey, Madison A., Coulibaly, Drissa, Lawton, Jonathan G., Stucke, Emily M., Zhou, Albert E., Berry, Andrea A., Bailey, Jason A., Pike, Andrew, Dara, Antoine, Ouattara, Amed, Lyke, Kirsten E., Ifeonu, Olukemi, Laurens, Matthew B., Adams, Matthew, Takala-Harrison, Shannon, Niangaly, Amadou, Kouriba, Bourema, Koné, Abdoulaye K., Rowe, J. Alexandra, Doumbo, Ogobara K., Patel, Jigar J., Tan, John C., Felgner, Philip L., Plowe, Christopher V., Thera, Mahamadou A., Travassos, Mark A.
Publicado 2023

Antibodies to Peptides in Semiconserved Domains of RIFINs and STEVORs Correlate with Malaria Exposure

por Zhou, Albert E., Berry, Andrea A., Bailey, Jason A., Pike, Andrew, Dara, Antoine, Agrawal, Sonia, Stucke, Emily M., Ouattara, Amed, Coulibaly, Drissa, Lyke, Kirsten E., Laurens, Matthew B., Adams, Matthew, Takala-Harrison, Shannon, Pablo, Jozelyn, Jasinskas, Algis, Nakajima, Rie, Niangaly, Amadou, Kouriba, Bourema, Kone, Abdoulaye K., Rowe, J. Alexandra, Doumbo, Ogobara K., Thera, Mahamadou A., Patel, Jigar J., Tan, John C., Felgner, Philip L., Plowe, Christopher V., Travassos, Mark A.
Publicado 2019

Successful Profiling of Plasmodium falciparum var Gene Expression in Clinical Samples via a Custom Capture Array

por Stucke, Emily M., Dara, Antoine, Dwivedi, Ankit, Hodges, Theresa K., Ott, Sandra, Coulibaly, Drissa, Koné, Abdoulaye K., Traoré, Karim, Guindo, Bouréima, Tangara, Bourama M., Niangaly, Amadou, Daou, Modibo, Diarra, Issa, Tolo, Youssouf, Sissoko, Mody, Tallon, Luke J., Sadzewicz, Lisa, Zhou, Albert E., Laurens, Matthew B., Ouattara, Amed, Kouriba, Bourema, Doumbo, Ogobara K., Takala-Harrison, Shannon, Serre, David, Plowe, Christopher V., Thera, Mahamadou A., Travassos, Mark A., Silva, Joana C.
Publicado 2021

Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease

por Kottyan, Leah C., Davis, Benjamin P., Sherrill, Joseph D., Liu, Kan, Rochman, Mark, Kaufman, Kenneth, Weirauch, Matthew T., Vaughn, Samuel, Lazaro, Sara, Rupert, Andrew M., Kohram, Mojtaba, Stucke, Emily M., Kemme, Katherine A., Magnusen, Albert, He, Hua, Dexheimer, Phillip, Chehade, Mirna, Wood, Robert A., Pesek, Robbie D., Vickery, Brian P., Fleischer, David M., Lindbad, Robert, Sampson, Hugh A., Mukkada, Vince, Putnam, Phil E., Abonia, J. Pablo, Martin, Lisa J., Harley, John B., Rothenberg, Marc E.
Publicado 2014

Strains used in whole organism Plasmodium falciparum vaccine trials differ in genome structure, sequence, and immunogenic potential

por Moser, Kara A., Drábek, Elliott F., Dwivedi, Ankit, Stucke, Emily M., Crabtree, Jonathan, Dara, Antoine, Shah, Zalak, Adams, Matthew, Li, Tao, Rodrigues, Priscila T., Koren, Sergey, Phillippy, Adam M., Munro, James B., Ouattara, Amed, Sparklin, Benjamin C., Dunning Hotopp, Julie C., Lyke, Kirsten E., Sadzewicz, Lisa, Tallon, Luke J., Spring, Michele D., Jongsakul, Krisada, Lon, Chanthap, Saunders, David L., Ferreira, Marcelo U., Nyunt, Myaing M., Laufer, Miriam K., Travassos, Mark A., Sauerwein, Robert W., Takala-Harrison, Shannon, Fraser, Claire M., Sim, B. Kim Lee, Hoffman, Stephen L., Plowe, Christopher V., Silva, Joana C.
Publicado 2020