Commonalities and Differences in the Transcriptional Response of the Model Fungus Saccharomyces cerevisiae to Different Commercial Graphene Oxide Materials

por Laguna-Teno, Felix, Suarez-Diez, Maria, Tamayo-Ramos, Juan Antonio
Publicado 2020

Building pathway graphs from BioPAX data in R

por Benis, Nirupama, Schokker, Dirkjan, Kramer, Frank, Smits, Mari A., Suarez-Diez, Maria
Publicado 2016

Phenotype and multi-omics comparison of Staphylococcus and Streptococcus uncovers pathogenic traits and predicts zoonotic potential

por Zondervan, Niels A., Martins dos Santos, Vitor A. P., Suarez-Diez, Maria, Saccenti, Edoardo
Publicado 2021

Correction to: Phenotype and multi-omics comparison of Staphylococcus and Streptococcus uncovers pathogenic traits and predicts zoonotic potential

por Zondervan, Niels A., Martins dos Santos, Vitor A. P., Suarez-Diez, Maria, Saccenti, Edoardo
Publicado 2021

Enzyme‐constrained models predict the dynamics of Saccharomyces cerevisiae growth in continuous, batch and fed‐batch bioreactors

por Moreno‐Paz, Sara, Schmitz, Joep, Martins dos Santos, Vitor A. P., Suarez‐Diez, Maria
Publicado 2022

Integration of heterogeneous molecular networks to unravel gene-regulation in Mycobacterium tuberculosis

por van Dam, Jesse CJ, Schaap, Peter J, Martins dos Santos, Vitor AP, Suárez-Diez, María
Publicado 2014

Modeling the Metabolic State of Mycobacterium tuberculosis Upon Infection

por Rienksma, Rienk A., Schaap, Peter J., Martins dos Santos, Vitor A. P., Suarez-Diez, Maria
Publicado 2018

Modeling Host-Pathogen Interaction to Elucidate the Metabolic Drug Response of Intracellular Mycobacterium tuberculosis

por Rienksma, Rienk A., Schaap, Peter J., Martins dos Santos, Vitor A. P., Suarez-Diez, Maria
Publicado 2019

Toxicological response of the model fungus Saccharomyces cerevisiae to different concentrations of commercial graphene nanoplatelets

por Suarez-Diez, Maria, Porras, Santiago, Laguna-Teno, Felix, Schaap, Peter J., Tamayo-Ramos, Juan A.
Publicado 2020

Tailoring and optimizing fatty acid production by oleaginous yeasts through the systematic exploration of their physiological fitness

por Duman-Özdamar, Zeynep Efsun, Martins dos Santos, Vitor A. P., Hugenholtz, Jeroen, Suarez-Diez, Maria
Publicado 2022

Genome-scale metabolic modeling underscores the potential of Cutaneotrichosporon oleaginosus ATCC 20509 as a cell factory for biofuel production

por Pham, Nhung, Reijnders, Maarten, Suarez-Diez, Maria, Nijsse, Bart, Springer, Jan, Eggink, Gerrit, Schaap, Peter J.
Publicado 2021

Galactocerebroside biosynthesis pathways of Mycoplasma species: an antigen triggering Guillain–Barré–Stohl syndrome

por Gaspari, Erika, Koehorst, Jasper J., Frey, Joachim, Martins dos Santos, Vitor A.P., Suarez‐Diez, Maria
Publicado 2021

A structured evaluation of genome-scale constraint-based modeling tools for microbial consortia

por Scott, William T., Benito-Vaquerizo, Sara, Zimmermann, Johannes, Bajić, Djordje, Heinken, Almut, Suarez-Diez, Maria, Schaap, Peter J.
Publicado 2023

Network analysis of temporal functionalities of the gut induced by perturbations in new-born piglets

por Benis, Nirupama, Schokker, Dirkjan, Suarez-Diez, Maria, Martins dos Santos, Vitor AP, Smidt, Hauke, Smits, Mari A
Publicado 2015

Protein domain architectures provide a fast, efficient and scalable alternative to sequence-based methods for comparative functional genomics

por Koehorst, Jasper J., Saccenti, Edoardo, Schaap, Peter J., Martins dos Santos, Vitor A. P., Suarez-Diez, Maria
Publicado 2017

Proteomic Analysis of a Syntrophic Coculture of Syntrophobacter fumaroxidans MPOB(T) and Geobacter sulfurreducens PCA(T)

por Mollaei, Monir, Suarez-Diez, Maria, Sedano-Nunez, Vicente T., Boeren, Sjef, Stams, Alfons J. M., Plugge, Caroline M.
Publicado 2021

RDF2Graph a tool to recover, understand and validate the ontology of an RDF resource

por van Dam, Jesse CJ, Koehorst, Jasper J, Schaap, Peter J, Martins dos Santos, Vitor AP, Suarez-Diez, Maria
Publicado 2015

Modulating D-amino acid oxidase (DAAO) substrate specificity through facilitated solvent access

por Subramanian, Kalyanasundaram, Góra, Artur, Spruijt, Ruud, Mitusińska, Karolina, Suarez-Diez, Maria, Martins dos Santos, Vitor, Schaap, Peter J.
Publicado 2018

Classification of the plant-associated lifestyle of Pseudomonas strains using genome properties and machine learning

por Poncheewin, Wasin, van Diepeningen, Anne D., van der Lee, Theo A. J., Suarez-Diez, Maria, Schaap, Peter J.
Publicado 2022

Screening and characterization of novel specific peptides targeting MDA-MB-231 claudin-low breast carcinoma by computer-aided phage display methodologies

por Nobrega, Franklin L., Ferreira, Débora, Martins, Ivone M., Suarez-Diez, Maria, Azeredo, Joana, Kluskens, Leon D., Rodrigues, Lígia R.
Publicado 2016