Meta-analysis of RNA-seq expression data across species, tissues and studies

por Sudmant, Peter H., Alexis, Maria S., Burge, Christopher B.
Publicado 2015

MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals

por Carlson, Keisha D., Sudmant, Peter H., Press, Maximilian O., Eichler, Evan E., Shendure, Jay, Queitsch, Christine
Publicado 2015

The Role of the Antiviral APOBEC3 Gene Family in Protecting Chimpanzees against Lentiviruses from Monkeys

por Etienne, Lucie, Bibollet-Ruche, Frederic, Sudmant, Peter H., Wu, Lily I., Hahn, Beatrice H., Emerman, Michael
Publicado 2015

Multiscale analysis of pangenomes enables improved representation of genomic diversity for repetitive and clinically relevant genes

por Chin, Chen-Shan, Behera, Sairam, Khalak, Asif, Sedlazeck, Fritz J., Sudmant, Peter H., Wagner, Justin, Zook, Justin M.
Publicado 2023

Tissue-specific impacts of aging and genetics on gene expression patterns in humans

por Yamamoto, Ryo, Chung, Ryan, Vazquez, Juan Manuel, Sheng, Huanjie, Steinberg, Philippa L., Ioannidis, Nilah M., Sudmant, Peter H.
Publicado 2022

Mitochondrial haplotype and mito-nuclear matching drive somatic mutation and selection throughout aging

por Serrano, Isabel M., Hirose, Misa, Valentine, Charles C., Roesner, Sharon, Schmidt, Elizabeth, Pratt, Gabriel, Williams, Lindsey, Salk, Jesse, Ibrahim, Saleh, Sudmant, Peter H.
Publicado 2023

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

por Ventura, Mario, Catacchio, Claudia R., Sajjadian, Saba, Vives, Laura, Sudmant, Peter H., Marques-Bonet, Tomas, Graves, Tina A., Wilson, Richard K., Eichler, Evan E.
Publicado 2012

The landscape of human tissue and cell type specific expression and co-regulation of senescence genes

por Xu, Peng, Wang, Minghui, Song, Won-min, Wang, Qian, Yuan, Guo-Cheng, Sudmant, Peter H., Zare, Habil, Tu, Zhidong, Orr, Miranda E., Zhang, Bin
Publicado 2022

Copy number variation detection and genotyping from exome sequence data

por Krumm, Niklas, Sudmant, Peter H., Ko, Arthur, O'Roak, Brian J., Malig, Maika, Coe, Bradley P., Quinlan, Aaron R., Nickerson, Deborah A., Eichler, Evan E.
Publicado 2012

Population Genomics of Variegated Toad-Headed Lizard Phrynocephalus versicolor and Its Adaptation to the Colorful Sand of the Gobi Desert

por Jin, Yuanting, Aguilar-Gómez, Diana, Y C Brandt, Débora, Square, Tyler A, Li, Jiasheng, Liu, Zhengxia, Wang, Tao, Sudmant, Peter H, Miller, Craig T, Nielsen, Rasmus
Publicado 2022

Highly-multiplexed and efficient long-amplicon PacBio and Nanopore sequencing of hundreds of full mitochondrial genomes

por Karin, Benjamin R., Arellano, Selene, Wang, Laura, Walzer, Kayla, Pomerantz, Aaron, Vasquez, Juan Manuel, Chatla, Kamalakar, Sudmant, Peter H., Bach, Bryan H., Smith, Lydia L., McGuire, Jimmy A.
Publicado 2023

Estimating human mutation rate using autozygosity in a founder population

por Campbell, Catarina D., Chong, Jessica X., Malig, Maika, Ko, Arthur, Dumont, Beth L., Han, Lide, Vives, Laura, O’Roak, Brian J., Sudmant, Peter H., Shendure, Jay, Abney, Mark, Ober, Carole, Eichler, Evan E.
Publicado 2012

Reconstructing complex regions of genomes using long-read sequencing technology

por Huddleston, John, Ranade, Swati, Malig, Maika, Antonacci, Francesca, Chaisson, Mark, Hon, Lawrence, Sudmant, Peter H., Graves, Tina A., Alkan, Can, Dennis, Megan Y., Wilson, Richard K., Turner, Stephen W., Korlach, Jonas, Eichler, Evan E.
Publicado 2014

Evolution and diversity of copy number variation in the great ape lineage

por Sudmant, Peter H., Huddleston, John, Catacchio, Claudia R., Malig, Maika, Hillier, LaDeana W., Baker, Carl, Mohajeri, Kiana, Kondova, Ivanela, Bontrop, Ronald E., Persengiev, Stephan, Antonacci, Francesca, Ventura, Mario, Prado-Martinez, Javier, Marques-Bonet, Tomas, Eichler, Evan E.
Publicado 2013

The hepatic integrated stress response suppresses the somatotroph axis to control liver damage in nonalcoholic fatty liver disease

por Ohkubo, Rika, Mu, Wei-Chieh, Wang, Chih-Ling, Song, Zehan, Barthez, Marine, Wang, Yifei, Mitchener, Nathaniel, Abdullayev, Rasul, Lee, Yeong Rim, Ma, Yuze, Curtin, Megan, Srinivasan, Suraj, Zhang, Xingjia, Yang, Fanghan, Sudmant, Peter H., Pisco, Angela Oliveira, Neff, Norma, Haynes, Cole M., Chen, Danica
Publicado 2022

Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability

por Antonacci, Francesca, Dennis, Megan Y., Huddleston, John, Sudmant, Peter H., Steinberg, Karyn Meltz, Rosenfeld, Jill A., Miroballo, Mattia, Graves, Tina A., Vives, Laura, Malig, Maika, Denman, Laura, Raja, Archana, Stuart, Andrew, Tang, Joyce, Munson, Brenton, Shaffer, Lisa G., Amemiya, Chris T., Wilson, Richard K., Eichler, Evan E.
Publicado 2014

Structural Diversity and African Origin of the 17q21.31 Inversion Polymorphism

por Steinberg, Karyn Meltz, Antonacci, Francesca, Sudmant, Peter H., Kidd, Jeffrey M., Campbell, Catarina D., Vives, Laura, Malig, Maika, Scheinfeldt, Laura, Beggs, William, Ibrahim, Muntaser, Lema, Godfrey, Nyambo, Thomas B., Omar, Sabah A., Bodo, Jean-Marie, Froment, Alain, Donnelly, Michael P., Kidd, Kenneth K., Tishkoff, Sarah A., Eichler, Evan E.
Publicado 2012

Reduced proteasome activity in the aging brain results in ribosome stoichiometry loss and aggregation

por Kelmer Sacramento, Erika, Kirkpatrick, Joanna M, Mazzetto, Mariateresa, Baumgart, Mario, Bartolome, Aleksandar, Di Sanzo, Simone, Caterino, Cinzia, Sanguanini, Michele, Papaevgeniou, Nikoletta, Lefaki, Maria, Childs, Dorothee, Bagnoli, Sara, Terzibasi Tozzini, Eva, Di Fraia, Domenico, Romanov, Natalie, Sudmant, Peter H, Huber, Wolfgang, Chondrogianni, Niki, Vendruscolo, Michele, Cellerino, Alessandro, Ori, Alessandro
Publicado 2020

Emergence of a Homo sapiens-specific gene family and chromosome 16p11.2 CNV susceptibility

por Nuttle, Xander, Giannuzzi, Giuliana, Duyzend, Michael H., Schraiber, Joshua G., Narvaiza, Iñigo, Sudmant, Peter H., Penn, Osnat, Chiatante, Giorgia, Malig, Maika, Huddleston, John, Benner, Chris, Camponeschi, Francesca, Ciofi-Baffoni, Simone, Stessman, Holly A.F., Marchetto, Maria C. N., Denman, Laura, Harshman, Lana, Baker, Carl, Raja, Archana, Penewit, Kelsi, Janke, Nicolette, Tang, W. Joyce, Ventura, Mario, Banci, Lucia, Antonacci, Francesca, Akey, Joshua M., Amemiya, Chris T., Gage, Fred H., Reymond, Alexandre, Eichler, Evan E.
Publicado 2016

The complete genome sequence of a Neandertal from the Altai Mountains

por Prüfer, Kay, Racimo, Fernando, Patterson, Nick, Jay, Flora, Sankararaman, Sriram, Sawyer, Susanna, Heinze, Anja, Renaud, Gabriel, Sudmant, Peter H., de Filippo, Cesare, Li, Heng, Mallick, Swapan, Dannemann, Michael, Fu, Qiaomei, Kircher, Martin, Kuhlwilm, Martin, Lachmann, Michael, Meyer, Matthias, Ongyerth, Matthias, Siebauer, Michael, Theunert, Christoph, Tandon, Arti, Moorjani, Priya, Pickrell, Joseph, Mullikin, James C., Vohr, Samuel H., Green, Richard E., Hellmann, Ines, Johnson, Philip L. F., Blanche, Hélène, Cann, Howard, Kitzman, Jacob O., Shendure, Jay, Eichler, Evan E., Lein, Ed S., Bakken, Trygve E., Golovanova, Liubov V., Doronichev, Vladimir B., Shunkov, Michael V., Derevianko, Anatoli P., Viola, Bence, Slatkin, Montgomery, Reich, David, Kelso, Janet, Pääbo, Svante
Publicado 2013