Comprehensive characterization of lncRNA-mRNA related ceRNA network across 12 major cancers

por Zhang, Yunpeng, Xu, Yanjun, Feng, Li, Li, Feng, Sun, Zeguo, Wu, Tan, Shi, Xinrui, Li, Jing, Li, Xia
Publicado 2016

Subpathway-LNCE: Identify dysfunctional subpathways competitively regulated by lncRNAs through integrating lncRNA-mRNA expression profile and pathway topologies

por Shi, Xinrui, Xu, Yanjun, Zhang, Chunlong, Feng, Li, Sun, Zeguo, Han, Junwei, Su, Fei, Zhang, Yunpeng, Li, Chunquan, Li, Xia
Publicado 2016

TYRO3 agonist as therapy for glomerular disease

por Zhong, Fang, Cai, Hong, Fu, Jia, Sun, Zeguo, Li, Zhengzhe, Bauman, David, Wang, Lois, Das, Bhaskar, Lee, Kyung, He, John Cijiang
Publicado 2023

BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases

por Xu, Yanjun, Yang, Haixiu, Wu, Tan, Dong, Qun, Sun, Zeguo, Shang, Desi, Li, Feng, Xu, Yingqi, Su, Fei, Liu, Siyao, Zhang, Yunpeng, Li, Xia
Publicado 2017

The LncRNA Connectivity Map: Using LncRNA Signatures to Connect Small Molecules, LncRNAs, and Diseases

por Yang, Haixiu, Shang, Desi, Xu, Yanjun, Zhang, Chunlong, Feng, Li, Sun, Zeguo, Shi, Xinrui, Zhang, Yunpeng, Han, Junwei, Su, Fei, Li, Chunquan, Li, Xia
Publicado 2017

ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis

por Han, Junwei, Shi, Xinrui, Zhang, Yunpeng, Xu, Yanjun, Jiang, Ying, Zhang, Chunlong, Feng, Li, Yang, Haixiu, Shang, Desi, Sun, Zeguo, Su, Fei, Li, Chunquan, Li, Xia
Publicado 2015

Global Prioritization of Disease Candidate Metabolites Based on a Multi-omics Composite Network

por Yao, Qianlan, Xu, Yanjun, Yang, Haixiu, Shang, Desi, Zhang, Chunlong, Zhang, Yunpeng, Sun, Zeguo, Shi, Xinrui, Feng, Li, Han, Junwei, Su, Fei, Li, Chunquan, Li, Xia
Publicado 2015

Subpathway-GMir: identifying miRNA-mediated metabolic subpathways by integrating condition-specific genes, microRNAs, and pathway topologies

por Feng, Li, Xu, Yanjun, Zhang, Yunpeng, Sun, Zeguo, Han, Junwei, Zhang, Chunlong, Yang, Haixiu, Shang, Desi, Su, Fei, Shi, Xinrui, Li, Shang, Li, Chunquan, Li, Xia
Publicado 2015

LncRNAs2Pathways: Identifying the pathways influenced by a set of lncRNAs of interest based on a global network propagation method

por Han, Junwei, Liu, Siyao, Sun, Zeguo, Zhang, Yunpeng, Zhang, Fan, Zhang, Chunlong, Shang, Desi, Yang, Haixiu, Su, Fei, Xu, Yanjun, Li, Chunquan, Ren, Huan, Li, Xia
Publicado 2017

LINE-1 promotes tumorigenicity and exacerbates tumor progression via stimulating metabolism reprogramming in non-small cell lung cancer

por Sun, Zeguo, Zhang, Rui, Zhang, Xiao, Sun, Yifei, Liu, Pengpeng, Francoeur, Nancy, Han, Lei, Lam, Wan Yee, Yi, Zhengzi, Sebra, Robert, Walsh, Martin, Yu, Jinpu, Zhang, Weijia
Publicado 2022

Subpathway-GM: identification of metabolic subpathways via joint power of interesting genes and metabolites and their topologies within pathways

por Li, Chunquan, Han, Junwei, Yao, Qianlan, Zou, Chendan, Xu, Yanjun, Zhang, Chunlong, Shang, Desi, Zhou, Lingyun, Zou, Chaoxia, Sun, Zeguo, Li, Jing, Zhang, Yunpeng, Yang, Haixiu, Gao, Xu, Li, Xia
Publicado 2013

Comparison of Kidney Transcriptomic Profiles of Early and Advanced Diabetic Nephropathy Reveals Potential New Mechanisms for Disease Progression

por Fan, Ying, Yi, Zhengzi, D’Agati, Vivette D., Sun, Zeguo, Zhong, Fang, Zhang, Weijia, Wen, Jiejun, Zhou, Ting, Li, Ze, He, Li, Zhang, Qunzi, Lee, Kyung, He, John Cijiang, Wang, Niansong
Publicado 2019

Erratum. Comparison of Kidney Transcriptomic Profiles of Early and Advanced Diabetic Nephropathy Reveals Potential New Mechanisms for Disease Progression. Diabetes 2019;68:2301–231...

por Fan, Ying, Yi, Zhengzi, D’Agati, Vivette D., Sun, Zeguo, Zhong, Fang, Zhang, Weijia, Wen, Jiejun, Zhou, Ting, Li, Ze, He, Li, Zhang, Qunzi, Lee, Kyung, He, John Cijiang, Wang, Niansong
Publicado 2020

Human TLR8 induces inflammatory bone marrow erythromyeloblastic islands and anemia in SLE-prone mice

por Maria, Naomi I, Papoin, Julien, Raparia, Chirag, Sun, Zeguo, Josselsohn, Rachel, Lu, Ailing, Katerji, Hani, Syeda, Mahrukh M, Polsky, David, Paulson, Robert, Kalfa, Theodosia, Barnes, Betsy J, Zhang, Weijia, Blanc, Lionel, Davidson, Anne
Publicado 2023

Molecular Analysis of the Kidney From a Patient With COVID-19–Associated Collapsing Glomerulopathy

por Meliambro, Kristin, Li, Xuezhu, Salem, Fadi, Yi, Zhengzi, Sun, Zeguo, Chan, Lili, Chung, Miriam, Chancay, Jorge, Vy, Ha My T., Nadkarni, Girish, Wong, Jenny S., Fu, Jia, Lee, Kyung, Zhang, Weijia, He, John C., Campbell, Kirk N.
Publicado 2021

MPINet: Metabolite Pathway Identification via Coupling of Global Metabolite Network Structure and Metabolomic Profile

por Li, Feng, Xu, Yanjun, Shang, Desi, Yang, Haixiu, Liu, Wei, Han, Junwei, Sun, Zeguo, Yao, Qianlan, Zhang, Chunlong, Ma, Jiquan, Su, Fei, Feng, Li, Shi, Xinrui, Zhang, Yunpeng, Li, Jing, Gu, Qi, Li, Xia, Li, Chunquan
Publicado 2014

HCK induces macrophage activation to promote renal inflammation and fibrosis via suppression of autophagy

por Chen, Man, Menon, Madhav C., Wang, Wenlin, Fu, Jia, Yi, Zhengzi, Sun, Zeguo, Liu, Jessica, Li, Zhengzhe, Mou, Lingyun, Banu, Khadija, Lee, Sui-Wan, Dai, Ying, Anandakrishnan, Nanditha, Azeloglu, Evren U., Lee, Kyung, Zhang, Weijia, Das, Bhaskar, He, John Cijiang, Wei, Chengguo
Publicado 2023

Multiscale genetic architecture of donor-recipient differences reveals intronic LIMS1 mismatches associated with kidney transplant survival

por Sun, Zeguo, Zhang, Zhongyang, Banu, Khadija, Gibson, Ian W., Colvin, Robert B., Yi, Zhengzi, Zhang, Weijia, De Kumar, Bony, Reghuvaran, Anand, Pell, John, Manes, Thomas D., Djamali, Arjang, Gallon, Lorenzo, O’Connell, Philip J., He, John Cijiang, Pober, Jordan S., Heeger, Peter S., Menon, Madhav C.
Publicado 2023