Transcripts with in silico predicted RNA structure are enriched everywhere in the mouse brain

por Seemann, Stefan E, Sunkin, Susan M, Hawrylycz, Michael J, Ruzzo, Walter L, Gorodkin, Jan
Publicado 2012

Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system

por Sunkin, Susan M., Ng, Lydia, Lau, Chris, Dolbeare, Tim, Gilbert, Terri L., Thompson, Carol L., Hawrylycz, Michael, Dang, Chinh
Publicado 2013

Organization of the connections between claustrum and cortex in the mouse

por Wang, Quanxin, Ng, Lydia, Harris, Julie A., Feng, David, Li, Yang, Royall, Josh J., Oh, Seung Wook, Bernard, Amy, Sunkin, Susan M., Koch, Christof, Zeng, Hongkui
Publicado 2016

Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data

por Lee, Chang-Kyu, Sunkin, Susan M, Kuan, Chihchau, Thompson, Carol L, Pathak, Sayan, Ng, Lydia, Lau, Chris, Fischer, Shanna, Mortrud, Marty, Slaughterbeck, Cliff, Jones, Allan, Lein, Ed, Hawrylycz, Michael
Publicado 2008

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain

por Madisen, Linda, Zwingman, Theresa A., Sunkin, Susan M., Oh, Seung Wook, Zariwala, Hatim A., Gu, Hong, Ng, Lydia L., Palmiter, Richard D., Hawrylycz, Michael J., Jones, Allan R., Lein, Ed S., Zeng, Hongkui
Publicado 2009

Spatiotemporal dynamics of the postnatal developing primate brain transcriptome

por Bakken, Trygve E., Miller, Jeremy A., Luo, Rui, Bernard, Amy, Bennett, Jeffrey L., Lee, Chang-Kyu, Bertagnolli, Darren, Parikshak, Neelroop N., Smith, Kimberly A., Sunkin, Susan M., Amaral, David G., Geschwind, Daniel H., Lein, Ed S.
Publicado 2015

Molecular and Anatomical Signatures of Sleep Deprivation in the Mouse Brain

por Thompson, Carol L., Wisor, Jonathan P., Lee, Chang-Kyu, Pathak, Sayan D., Gerashchenko, Dmitry, Smith, Kimberly A., Fischer, Shanna R., Kuan, Chihchau L., Sunkin, Susan M., Ng, Lydia L., Lau, Christopher, Hawrylycz, Michael, Jones, Allan R., Kilduff, Thomas S., Lein, Edward S.
Publicado 2010

Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation

por Harris, Julie A., Hirokawa, Karla E., Sorensen, Staci A., Gu, Hong, Mills, Maya, Ng, Lydia L., Bohn, Phillip, Mortrud, Marty, Ouellette, Benjamin, Kidney, Jolene, Smith, Kimberly A., Dang, Chinh, Sunkin, Susan, Bernard, Amy, Oh, Seung Wook, Madisen, Linda, Zeng, Hongkui
Publicado 2014

Adult Mouse Cortical Cell Taxonomy by Single Cell Transcriptomics

por Tasic, Bosiljka, Menon, Vilas, Nguyen, Thuc Nghi, Kim, Tae Kyung, Jarsky, Tim, Yao, Zizhen, Levi, Boaz, Gray, Lucas T., Sorensen, Staci A., Dolbeare, Tim, Bertagnolli, Darren, Goldy, Jeff, Shapovalova, Nadiya, Parry, Sheana, Lee, Changkyu, Smith, Kimberly, Bernard, Amy, Madisen, Linda, Sunkin, Susan M., Hawrylycz, Michael, Koch, Christof, Zeng, Hongkui
Publicado 2016

An evolutionary driver of interspersed segmental duplications in primates

por Cantsilieris, Stuart, Sunkin, Susan M., Johnson, Matthew E., Anaclerio, Fabio, Huddleston, John, Baker, Carl, Dougherty, Max L., Underwood, Jason G., Sulovari, Arvis, Hsieh, PingHsun, Mao, Yafei, Catacchio, Claudia Rita, Malig, Maika, Welch, AnneMarie E., Sorensen, Melanie, Munson, Katherine M., Jiang, Weihong, Girirajan, Santhosh, Ventura, Mario, Lamb, Bruce T., Conlon, Ronald A., Eichler, Evan E.
Publicado 2020

Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons

por Hodge, Rebecca D., Miller, Jeremy A., Novotny, Mark, Kalmbach, Brian E., Ting, Jonathan T., Bakken, Trygve E., Aevermann, Brian D., Barkan, Eliza R., Berkowitz-Cerasano, Madeline L., Cobbs, Charles, Diez-Fuertes, Francisco, Ding, Song-Lin, McCorrison, Jamison, Schork, Nicholas J., Shehata, Soraya I., Smith, Kimberly A., Sunkin, Susan M., Tran, Danny N., Venepally, Pratap, Yanny, Anna Marie, Steemers, Frank J., Phillips, John W., Bernard, Amy, Koch, Christof, Lasken, Roger S., Scheuermann, Richard H., Lein, Ed S.
Publicado 2020

Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans

por Bakken, Trygve E, van Velthoven, Cindy TJ, Menon, Vilas, Hodge, Rebecca D, Yao, Zizhen, Nguyen, Thuc Nghi, Graybuck, Lucas T, Horwitz, Gregory D, Bertagnolli, Darren, Goldy, Jeff, Yanny, Anna Marie, Garren, Emma, Parry, Sheana, Casper, Tamara, Shehata, Soraya I, Barkan, Eliza R, Szafer, Aaron, Levi, Boaz P, Dee, Nick, Smith, Kimberly A, Sunkin, Susan M, Bernard, Amy, Phillips, John, Hawrylycz, Michael J, Koch, Christof, Murphy, Gabe J, Lein, Ed, Zeng, Hongkui, Tasic, Bosiljka
Publicado 2021

Cellular resolution anatomical and molecular atlases for prenatal human brains

por Ding, Song‐Lin, Royall, Joshua J., Lesnar, Phil, Facer, Benjamin A.C., Smith, Kimberly A., Wei, Yina, Brouner, Kristina, Dalley, Rachel A., Dee, Nick, Dolbeare, Tim A., Ebbert, Amanda, Glass, Ian A., Keller, Nika H., Lee, Felix, Lemon, Tracy A., Nyhus, Julie, Pendergraft, Julie, Reid, Robert, Sarreal, Melaine, Shapovalova, Nadiya V., Szafer, Aaron, Phillips, John W., Sunkin, Susan M., Hohmann, John G., Jones, Allan R., Hawrylycz, Michael J., Hof, Patrick R., Ng, Lydia, Bernard, Amy, Lein, Ed S.
Publicado 2021

Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type

por Boldog, Eszter, Bakken, Trygve E., Hodge, Rebecca D., Novotny, Mark, Aevermann, Brian D., Baka, Judith, Bordé, Sándor, Close, Jennie L., Diez-Fuertes, Francisco, Ding, Song-Lin, Faragó, Nóra, Kocsis, Ágnes K., Kovács, Balázs, Maltzer, Zoe, McCorrison, Jamison M., Miller, Jeremy A., Molnár, Gábor, Oláh, Gáspár, Ozsvár, Attila, Rózsa, Márton, Shehata, Soraya I., Smith, Kimberly A., Sunkin, Susan M., Tran, Danny N., Venepally, Pratap, Wall, Abby, Puskás, László G., Barzó, Pál, Steemers, Frank J., Schork, Nicholas J., Scheuermann, Richard H., Lasken, Roger S., Lein, Ed S., Tamás, Gábor
Publicado 2018

Comprehensive cellular‐resolution atlas of the adult human brain

por Ding, Song‐Lin, Royall, Joshua J., Sunkin, Susan M., Ng, Lydia, Facer, Benjamin A.C., Lesnar, Phil, Guillozet‐Bongaarts, Angie, McMurray, Bergen, Szafer, Aaron, Dolbeare, Tim A., Stevens, Allison, Tirrell, Lee, Benner, Thomas, Caldejon, Shiella, Dalley, Rachel A., Dee, Nick, Lau, Christopher, Nyhus, Julie, Reding, Melissa, Riley, Zackery L., Sandman, David, Shen, Elaine, van der Kouwe, Andre, Varjabedian, Ani, Write, Michelle, Zollei, Lilla, Dang, Chinh, Knowles, James A., Koch, Christof, Phillips, John W., Sestan, Nenad, Wohnoutka, Paul, Zielke, H. Ronald, Hohmann, John G., Jones, Allan R., Bernard, Amy, Hawrylycz, Michael J., Hof, Patrick R., Fischl, Bruce, Lein, Ed S.
Publicado 2016

Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex

por Mich, John K., Graybuck, Lucas T., Hess, Erik E., Mahoney, Joseph T., Kojima, Yoshiko, Ding, Yi, Somasundaram, Saroja, Miller, Jeremy A., Kalmbach, Brian E., Radaelli, Cristina, Gore, Bryan B., Weed, Natalie, Omstead, Victoria, Bishaw, Yemeserach, Shapovalova, Nadiya V., Martinez, Refugio A., Fong, Olivia, Yao, Shenqin, Mortrud, Marty, Chong, Peter, Loftus, Luke, Bertagnolli, Darren, Goldy, Jeff, Casper, Tamara, Dee, Nick, Opitz-Araya, Ximena, Cetin, Ali, Smith, Kimberly A., Gwinn, Ryder P., Cobbs, Charles, Ko, Andrew L., Ojemann, Jeffrey G., Keene, C. Dirk, Silbergeld, Daniel L., Sunkin, Susan M., Gradinaru, Viviana, Horwitz, Gregory D., Zeng, Hongkui, Tasic, Bosiljka, Lein, Ed S., Ting, Jonathan T., Levi, Boaz P.
Publicado 2021

Conserved cell types with divergent features in human versus mouse cortex

por Hodge, Rebecca D, Bakken, Trygve E, Miller, Jeremy A, Smith, Kimberly A, Barkan, Eliza R, Graybuck, Lucas T, Close, Jennie L, Long, Brian, Johansen, Nelson, Penn, Osnat, Yao, Zizhen, Eggermont, Jeroen, Hollt, Thomas, Levi, Boaz P, Shehata, Soraya I, Aevermann, Brian, Beller, Allison, Bertagnolli, Darren, Brouner, Krissy, Casper, Tamara, Cobbs, Charles, Dalley, Rachel, Dee, Nick, Ding, Song-Lin, Ellenbogen, Richard G, Fong, Olivia, Garren, Emma, Goldy, Jeff, Gwinn, Ryder P, Hirschstein, Daniel, Keene, C Dirk, Keshk, Mohamed, Ko, Andrew L, Lathia, Kanan, Mahfouz, Ahmed, Maltzer, Zoe, McGraw, Medea, Nguyen, Thuc Nghi, Nyhus, Julie, Ojemann, Jeffrey G, Oldre, Aaron, Parry, Sheana, Reynolds, Shannon, Rimorin, Christine, Shapovalova, Nadiya V, Somasundaram, Saroja, Szafer, Aaron, Thomsen, Elliot R, Tieu, Michael, Quon, Gerald, Scheuermann, Richard H, Yuste, Rafael, Sunkin, Susan M, Lelieveldt, Boudewijn, Feng, David, Ng, Lydia, Bernard, Amy, Hawrylycz, Michael, Phillips, John W., Tasic, Bosiljka, Zeng, Hongkui, Jones, Allan R, Koch, Christof, Lein, Ed S
Publicado 2019

A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain

por Yao, Zizhen, van Velthoven, Cindy T. J., Kunst, Michael, Zhang, Meng, McMillen, Delissa, Lee, Changkyu, Jung, Won, Goldy, Jeff, Abdelhak, Aliya, Baker, Pamela, Barkan, Eliza, Bertagnolli, Darren, Campos, Jazmin, Carey, Daniel, Casper, Tamara, Chakka, Anish Bhaswanth, Chakrabarty, Rushil, Chavan, Sakshi, Chen, Min, Clark, Michael, Close, Jennie, Crichton, Kirsten, Daniel, Scott, Dolbeare, Tim, Ellingwood, Lauren, Gee, James, Glandon, Alexandra, Gloe, Jessica, Gould, Joshua, Gray, James, Guilford, Nathan, Guzman, Junitta, Hirschstein, Daniel, Ho, Windy, Jin, Kelly, Kroll, Matthew, Lathia, Kanan, Leon, Arielle, Long, Brian, Maltzer, Zoe, Martin, Naomi, McCue, Rachel, Meyerdierks, Emma, Nguyen, Thuc Nghi, Pham, Trangthanh, Rimorin, Christine, Ruiz, Augustin, Shapovalova, Nadiya, Slaughterbeck, Cliff, Sulc, Josef, Tieu, Michael, Torkelson, Amy, Tung, Herman, Cuevas, Nasmil Valera, Wadhwani, Katherine, Ward, Katelyn, Levi, Boaz, Farrell, Colin, Thompson, Carol L., Mufti, Shoaib, Pagan, Chelsea M., Kruse, Lauren, Dee, Nick, Sunkin, Susan M., Esposito, Luke, Hawrylycz, Michael J., Waters, Jack, Ng, Lydia, Smith, Kimberly A., Tasic, Bosiljka, Zhuang, Xiaowei, Zeng, Hongkui
Publicado 2023

Morphological diversity of single neurons in molecularly defined cell types

por Peng, Hanchuan, Xie, Peng, Liu, Lijuan, Kuang, Xiuli, Wang, Yimin, Qu, Lei, Gong, Hui, Jiang, Shengdian, Li, Anan, Ruan, Zongcai, Ding, Liya, Yao, Zizhen, Chen, Chao, Chen, Mengya, Daigle, Tanya L., Dalley, Rachel, Ding, Zhangcan, Duan, Yanjun, Feiner, Aaron, He, Ping, Hill, Chris, Hirokawa, Karla E., Hong, Guodong, Huang, Lei, Kebede, Sara, Kuo, Hsien-Chi, Larsen, Rachael, Lesnar, Phil, Li, Longfei, Li, Qi, Li, Xiangning, Li, Yaoyao, Li, Yuanyuan, Liu, An, Lu, Donghuan, Mok, Stephanie, Ng, Lydia, Nguyen, Thuc Nghi, Ouyang, Qiang, Pan, Jintao, Shen, Elise, Song, Yuanyuan, Sunkin, Susan M., Tasic, Bosiljka, Veldman, Matthew B., Wakeman, Wayne, Wan, Wan, Wang, Peng, Wang, Quanxin, Wang, Tao, Wang, Yaping, Xiong, Feng, Xiong, Wei, Xu, Wenjie, Ye, Min, Yin, Lulu, Yu, Yang, Yuan, Jia, Yuan, Jing, Yun, Zhixi, Zeng, Shaoqun, Zhang, Shichen, Zhao, Sujun, Zhao, Zijun, Zhou, Zhi, Huang, Z. Josh, Esposito, Luke, Hawrylycz, Michael J., Sorensen, Staci A., Yang, X. William, Zheng, Yefeng, Gu, Zhongze, Xie, Wei, Koch, Christof, Luo, Qingming, Harris, Julie A., Wang, Yun, Zeng, Hongkui
Publicado 2021

Neuropathological and transcriptomic characteristics of the aged brain

por Miller, Jeremy A, Guillozet-Bongaarts, Angela, Gibbons, Laura E, Postupna, Nadia, Renz, Anne, Beller, Allison E, Sunkin, Susan M, Ng, Lydia, Rose, Shannon E, Smith, Kimberly A, Szafer, Aaron, Barber, Chris, Bertagnolli, Darren, Bickley, Kristopher, Brouner, Krissy, Caldejon, Shiella, Chapin, Mike, Chua, Mindy L, Coleman, Natalie M, Cudaback, Eiron, Cuhaciyan, Christine, Dalley, Rachel A, Dee, Nick, Desta, Tsega, Dolbeare, Tim A, Dotson, Nadezhda I, Fisher, Michael, Gaudreault, Nathalie, Gee, Garrett, Gilbert, Terri L, Goldy, Jeff, Griffin, Fiona, Habel, Caroline, Haradon, Zeb, Hejazinia, Nika, Hellstern, Leanne L, Horvath, Steve, Howard, Kim, Howard, Robert, Johal, Justin, Jorstad, Nikolas L, Josephsen, Samuel R, Kuan, Chihchau L, Lai, Florence, Lee, Eric, Lee, Felix, Lemon, Tracy, Li, Xianwu, Marshall, Desiree A, Melchor, Jose, Mukherjee, Shubhabrata, Nyhus, Julie, Pendergraft, Julie, Potekhina, Lydia, Rha, Elizabeth Y, Rice, Samantha, Rosen, David, Sapru, Abharika, Schantz, Aimee, Shen, Elaine, Sherfield, Emily, Shi, Shu, Sodt, Andy J, Thatra, Nivretta, Tieu, Michael, Wilson, Angela M, Montine, Thomas J, Larson, Eric B, Bernard, Amy, Crane, Paul K, Ellenbogen, Richard G, Keene, C Dirk, Lein, Ed
Publicado 2017