CORECLUST: identification of the conserved CRM grammar together with prediction of gene regulation

por Nikulova, Anna A., Favorov, Alexander V., Sutormin, Roman A., Makeev, Vsevolod J., Mironov, Andrey A.
Publicado 2012

The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences

por Leushkin, Evgeny V, Sutormin, Roman A, Nabieva, Elena R, Penin, Aleksey A, Kondrashov, Alexey S, Logacheva, Maria D
Publicado 2013

Comparative genome analysis of Pseudogymnoascus spp. reveals primarily clonal evolution with small genome fragments exchanged between lineages

por Leushkin, Evgeny V, Logacheva, Maria D, Penin, Aleksey A, Sutormin, Roman A, Gerasimov, Evgeny S, Kochkina, Galina A, Ivanushkina, Natalia E, Vasilenko, Oleg V, Kondrashov, Alexey S, Ozerskaya, Svetlana M
Publicado 2015

RegPrecise 3.0 – A resource for genome-scale exploration of transcriptional regulation in bacteria

por Novichkov, Pavel S, Kazakov, Alexey E, Ravcheev, Dmitry A, Leyn, Semen A, Kovaleva, Galina Y, Sutormin, Roman A, Kazanov, Marat D, Riehl, William, Arkin, Adam P, Dubchak, Inna, Rodionov, Dmitry A
Publicado 2013

KBase: The United States Department of Energy Systems Biology Knowledgebase

por Arkin, Adam P, Cottingham, Robert W, Henry, Christopher S, Harris, Nomi L, Stevens, Rick L, Maslov, Sergei, Dehal, Paramvir, Ware, Doreen, Perez, Fernando, Canon, Shane, Sneddon, Michael W, Henderson, Matthew L, Riehl, William J, Murphy-Olson, Dan, Chan, Stephen Y, Kamimura, Roy T, Kumari, Sunita, Drake, Meghan M, Brettin, Thomas S, Glass, Elizabeth M, Chivian, Dylan, Gunter, Dan, Weston, David J, Allen, Benjamin H, Baumohl, Jason, Best, Aaron A, Bowen, Ben, Brenner, Steven E, Bun, Christopher C, Chandonia, John-Marc, Chia, Jer-Ming, Colasanti, Ric, Conrad, Neal, Davis, James J, Davison, Brian H, DeJongh, Matthew, Devoid, Scott, Dietrich, Emily, Dubchak, Inna, Edirisinghe, Janaka N, Fang, Gang, Faria, José P, Frybarger, Paul M, Gerlach, Wolfgang, Gerstein, Mark, Greiner, Annette, Gurtowski, James, Haun, Holly L, He, Fei, Jain, Rashmi, Joachimiak, Marcin P, Keegan, Kevin P, Kondo, Shinnosuke, Kumar, Vivek, Land, Miriam L, Meyer, Folker, Mills, Marissa, Novichkov, Pavel S, Oh, Taeyun, Olsen, Gary J, Olson, Robert, Parrello, Bruce, Pasternak, Shiran, Pearson, Erik, Poon, Sarah S, Price, Gavin A, Ramakrishnan, Srividya, Ranjan, Priya, Ronald, Pamela C, Schatz, Michael C, Seaver, Samuel M D, Shukla, Maulik, Sutormin, Roman A, Syed, Mustafa H, Thomason, James, Tintle, Nathan L, Wang, Daifeng, Xia, Fangfang, Yoo, Hyunseung, Yoo, Shinjae, Yu, Dantong
Publicado 2018