ValTrendsDB: bringing Protein Data Bank validation information closer to the user

por Horský, Vladimír, Bendová, Veronika, Toušek, Dominik, Koča, Jaroslav, Svobodová, Radka
Publicado 2019

Optimized SQE atomic charges for peptides accessible via a web application

por Schindler, Ondřej, Raček, Tomáš, Maršavelski, Aleksandra, Koča, Jaroslav, Berka, Karel, Svobodová, Radka
Publicado 2021

Correction to: Optimized SQE atomic charges for peptides accessible via a web application

por Schindler, Ondřej, Raček, Tomáš, Maršavelski, Aleksandra, Koča, Jaroslav, Berka, Karel, Svobodová, Radka
Publicado 2021

Uncovering of cytochrome P450 anatomy by SecStrAnnotator

por Midlik, Adam, Navrátilová, Veronika, Moturu, Taraka Ramji, Koča, Jaroslav, Svobodová, Radka, Berka, Karel
Publicado 2021

αCharges: partial atomic charges for AlphaFold structures in high quality

por Schindler, Ondřej, Berka, Karel, Cantara, Alessio, Křenek, Aleš, Tichý, Dominik, Raček, Tomáš, Svobodová, Radka
Publicado 2023

Atomic Charge Calculator II: web-based tool for the calculation of partial atomic charges

por Raček, Tomáš, Schindler, Ondřej, Toušek, Dominik, Horský, Vladimír, Berka, Karel, Koča, Jaroslav, Svobodová, Radka
Publicado 2020

BinaryCIF and CIFTools—Lightweight, efficient and extensible macromolecular data management

por Sehnal, David, Bittrich, Sebastian, Velankar, Sameer, Koča, Jaroslav, Svobodová, Radka, Burley, Stephen K., Rose, Alexander S.
Publicado 2020

High-performance macromolecular data delivery and visualization for the web

por Sehnal, David, Svobodová, Radka, Berka, Karel, Rose, Alexander S., Burley, Stephen K., Velankar, Sameer, Koča, Jaroslav
Publicado 2020

High-performance macromolecular data delivery and visualization for the web. Corrigendum

por Sehnal, David, Svobodová, Radka, Berka, Karel, Rose, Alexander S., Burley, Stephen K., Velankar, Sameer, Koča, Jaroslav
Publicado 2021

2DProts: database of family-wide protein secondary structure diagrams

por Hutařová Vařeková, Ivana, Hutař, Jan, Midlik, Adam, Horský, Vladimír, Hladká, Eva, Svobodová, Radka, Berka, Karel
Publicado 2021

Mol* Volumes and Segmentations: visualization and interpretation of cell imaging data alongside macromolecular structure data and biological annotations

por Chareshneu, Aliaksei, Midlik, Adam, Ionescu, Crina-Maria, Rose, Alexander, Horský, Vladimír, Cantara, Alessio, Svobodová, Radka, Berka, Karel, Sehnal, David
Publicado 2023

Serum tenascin-C discriminates patients with active SLE from inactive patients and healthy controls and predicts the need to escalate immunosuppressive therapy: a cohort study

por Závada, Jakub, Uher, Michal, Svobodová, Radka, Olejárová, Marta, Hušáková, Markéta, Ciferská, Hana, Hulejová, Hana, Tomčík, Michal, Šenolt, Ladislav, Vencovský, Jiří
Publicado 2015

Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures

por Sehnal, David, Bittrich, Sebastian, Deshpande, Mandar, Svobodová, Radka, Berka, Karel, Bazgier, Václav, Velankar, Sameer, Burley, Stephen K, Koča, Jaroslav, Rose, Alexander S
Publicado 2021

CATH: increased structural coverage of functional space

por Sillitoe, Ian, Bordin, Nicola, Dawson, Natalie, Waman, Vaishali P, Ashford, Paul, Scholes, Harry M, Pang, Camilla S M, Woodridge, Laurel, Rauer, Clemens, Sen, Neeladri, Abbasian, Mahnaz, Le Cornu, Sean, Lam, Su Datt, Berka, Karel, Varekova, Ivana Hutařová, Svobodova, Radka, Lees, Jon, Orengo, Christine A
Publicado 2020