flexiMAP: a regression-based method for discovering differential alternative polyadenylation events in standard RNA-seq data

por Szkop, Krzysztof J, Moss, David S, Nobeli, Irene
Publicado 2020

Multiple sources of bias confound functional enrichment analysis of global -omics data

por Timmons, James A., Szkop, Krzysztof J., Gallagher, Iain J.
Publicado 2015

Dysregulation of Alternative Poly-adenylation as a Potential Player in Autism Spectrum Disorder

por Szkop, Krzysztof J., Cooke, Peter I. C., Humphries, Joanne A., Kalna, Viktoria, Moss, David S., Schuster, Eugene F., Nobeli, Irene
Publicado 2017

Translatome analysis of Tuberous Sclerosis Complex-1 patient-derived neural progenitor cells reveal rapamycin-dependent and independent alterations

por Aksoylu, Inci S., Martin, Pauline, Robert, Francis, Szkop, Krzysztof J., Redmond, Nicholas E., Chen, Shan, Beauchamp, Roberta L., Nobeli, Irene, Pelletier, Jerry, Larsson, Ola, Ramesh, Vijaya
Publicado 2023

Translatome analysis of tuberous sclerosis complex 1 patient-derived neural progenitor cells reveals rapamycin-dependent and independent alterations

por Aksoylu, Inci S., Martin, Pauline, Robert, Francis, Szkop, Krzysztof J., Redmond, Nicholas E., Bhattacharyya, Srirupa, Wang, Jennifer, Chen, Shan, Beauchamp, Roberta L., Nobeli, Irene, Pelletier, Jerry, Larsson, Ola, Ramesh, Vijaya
Publicado 2023

iGEMS: an integrated model for identification of alternative exon usage events

por Sood, Sanjana, Szkop, Krzysztof J., Nakhuda, Asif, Gallagher, Iain J., Murie, Carl, Brogan, Robert J., Kaprio, Jaakko, Kainulainen, Heikki, Atherton, Philip J., Kujala, Urho M., Gustafsson, Thomas, Larsson, Ola, Timmons, James A.
Publicado 2016

Stress-induced perturbations in intracellular amino acids reprogram mRNA translation in osmoadaptation independently of the ISR

por Krokowski, Dawid, Jobava, Raul, Szkop, Krzysztof J., Chen, Chien-Wen, Fu, Xu, Venus, Sarah, Guan, Bo-Jhih, Wu, Jing, Gao, Zhaofeng, Banaszuk, Wioleta, Tchorzewski, Marek, Mu, Tingwei, Ropelewski, Phil, Merrick, William C., Mao, Yuanhui, Sevval, Aksoylu Inci, Miranda, Helen, Qian, Shu-Bing, Manifava, Maria, Ktistakis, Nicholas T., Vourekas, Anastasios, Jankowsky, Eckhard, Topisirovic, Ivan, Larsson, Ola, Hatzoglou, Maria
Publicado 2022